HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:8.9 nTPM
HPA Brain:25.0 nTPM
GTEx:8.9 nTPM
FANTOM5:15.7 Scaled Tags Per Million
Pig:9.1 nTPM
Mouse:11.3 nTPM
Allen mouse:2.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.0
Sample id Sample description nTPM
Hippocampus
nTPM: 23.7
2529 Female, age 94, left hemisphere 27.9
1855 Male, age 76, left hemisphere 24.8
1911 Female, age 85, right hemisphere 23.6
2621 Female, age 67, right hemisphere 23.4
2148 Female, age 91, left hemisphere 22.8
1898 Male, age 80, left hemisphere 19.9
Dentate gyrus
nTPM: 23.3
2010 Male, age 76, both hemispheres 25.6
2531 Female, age 67, both hemispheres 25.1
2528 Male, age 74, both hemispheres 23.9
2246 Female, age 85, both hemispheres 23.8
1927 Female, age 91, both hemispheres 23.4
2530 Female, age 94, left hemisphere 17.8
Entorhinal gyrus
nTPM: 22.7
2686 Male, age 75, right hemisphere 24.6
2764 Male, age 80, right hemisphere 23.1
1787 Male, age 76, left hemisphere 22.8
1938 Female, age 85, left hemisphere 22.2
2117 Female, age 91, right hemisphere 21.9
2613 Female, age 94, left hemisphere 21.5
Hippocampus, CA1
nTPM: 24.1
2045 Male, age 76, both hemispheres 26.1
2749 Male, age 80, left hemisphere 25.5
2527 Male, age 74, both hemispheres 24.1
2082 Female, age 91, right hemisphere 24.0
1873 Female, age 85, both hemispheres 20.8
Hippocampus, CA2
nTPM: 23.4
1963 Male, age 80, left hemisphere 26.3
1892 Male, age 76, both hemispheres 24.9
2113 Female, age 91, right hemisphere 23.6
2437 Female, age 94, left hemisphere 22.9
1940 Female, age 85, left hemisphere 21.9
2249 Male, age 74, both hemispheres 20.9
Hippocampus, CA3
nTPM: 24.6
2137 Male, age 80, left hemisphere 27.4
2861 Female, age 67, both hemispheres 26.2
2620 Female, age 94, left hemisphere 26.1
1867 Male, age 76, both hemispheres 25.7
1891 Female, age 85, both hemispheres 22.1
2436 Male, age 74, both hemispheres 19.9
Parahippocampal cortex
nTPM: 24.7
2692 Male, age 74, both hemispheres 28.0
2245 Female, age 91, both hemispheres 27.8
2018 Male, age 76, both hemispheres 25.9
2622 Female, age 67, right hemisphere 25.4
2250 Female, age 67, right hemisphere 25.2
1933 Female, age 85, both hemispheres 24.2
1990 Female, age 91, right hemisphere 23.4
2693 Female, age 94, both hemispheres 22.8
1850 Male, age 80, both hemispheres 22.4
2532 Female, age 72, left hemisphere 22.1
Perirhinal gyrus
nTPM: 22.0
1841 Female, age 85, right hemisphere 23.5
2521 Female, age 94, right hemisphere 22.3
1847 Female, age 91, left hemisphere 21.8
2848 Male, age 76, right hemisphere 21.4
1794 Male, age 80, right hemisphere 20.9
Subiculum
nTPM: 25.0
2438 Female, age 94, left hemisphere 29.1
2042 Male, age 76, both hemispheres 27.0
1901 Male, age 80, both hemispheres 25.4
2729 Female, age 91, right hemisphere 23.9
2619 Male, age 74, both hemispheres 23.0
1977 Female, age 85, both hemispheres 21.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.9
Samples: 197

Max nTPM: 17.6
Min nTPM: 5.3
Std nTPM: 1.8
Median nTPM: 8.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 17.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 15.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 14.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 13.5
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 13.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 13.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 13.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 12.6
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 12.1
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 12.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 11.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.7
FF:10153-102I9 76 years, female 15.9
FF:10169-103B7 60 years, female 15.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.1
Pig sample Sample description nTPM
Subiculum
nTPM: 9.0
Samples: 4

Max nTPM: 9.3
Min nTPM: 8.6
Sample A Female 8.6
Sample B Female 9.2
Sample C Male 9.3
Sample D Male 8.9
Dorsal hippocampus
nTPM: 8.5
Samples: 4

Max nTPM: 8.8
Min nTPM: 8.4
Sample A Female 8.8
Sample B Female 8.4
Sample C Male 8.4
Sample D Male 8.5
Entorhinal cortex
nTPM: 8.5
Samples: 4

Max nTPM: 8.6
Min nTPM: 8.4
Sample A Female 8.4
Sample B Female 8.4
Sample C Male 8.6
Sample D Male 8.5
Ventral hippocampus
nTPM: 9.1
Samples: 4

Max nTPM: 9.5
Min nTPM: 8.4
Sample A Female 9.2
Sample B Female 9.5
Sample C Male 9.3
Sample D Male 8.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.8
Samples: 4

Max nTPM: 11.6
Min nTPM: 9.5
Sample A Male 10.9
Sample B Male 9.5
Sample C Female 11.1
Sample D Female 11.6
Hippocampal formation
nTPM: 11.3
Samples: 4

Max nTPM: 13.6
Min nTPM: 9.1
Sample A Male 9.9
Sample B Male 9.1
Sample C Female 12.5
Sample D Female 13.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.5
2429 Antisense, RP_040604_01_H10, Mouse strain C57BL/6J (56 days, male) 2.5
2430 Antisense, RP_040604_01_H10, Mouse strain C57BL/6J (56 days, male) 0.7

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