HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:23.7 nTPM
HPA Brain:38.0 nTPM
GTEx:23.7 nTPM
FANTOM5:55.0 Scaled Tags Per Million
Pig:36.1 nTPM
Mouse:30.4 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB025123
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 38.0
Sample id Sample description nTPM
Hippocampus
nTPM: 36.6
2529 Female, age 94, left hemisphere 45.8
1855 Male, age 76, left hemisphere 37.7
2148 Female, age 91, left hemisphere 36.9
1911 Female, age 85, right hemisphere 34.4
1898 Male, age 80, left hemisphere 33.6
2621 Female, age 67, right hemisphere 31.1
Dentate gyrus
nTPM: 30.5
2246 Female, age 85, both hemispheres 39.5
2528 Male, age 74, both hemispheres 38.3
2010 Male, age 76, both hemispheres 35.8
1927 Female, age 91, both hemispheres 26.7
2530 Female, age 94, left hemisphere 22.8
2531 Female, age 67, both hemispheres 19.7
Entorhinal gyrus
nTPM: 29.0
2117 Female, age 91, right hemisphere 43.7
1938 Female, age 85, left hemisphere 41.8
2686 Male, age 75, right hemisphere 26.5
1787 Male, age 76, left hemisphere 25.1
2764 Male, age 80, right hemisphere 20.2
2613 Female, age 94, left hemisphere 16.7
Hippocampus, CA1
nTPM: 38.0
2527 Male, age 74, both hemispheres 59.8
2082 Female, age 91, right hemisphere 39.5
1873 Female, age 85, both hemispheres 31.6
2045 Male, age 76, both hemispheres 31.2
2749 Male, age 80, left hemisphere 27.9
Hippocampus, CA2
nTPM: 34.1
2249 Male, age 74, both hemispheres 60.3
2113 Female, age 91, right hemisphere 37.5
1940 Female, age 85, left hemisphere 34.9
2437 Female, age 94, left hemisphere 24.9
1963 Male, age 80, left hemisphere 23.7
1892 Male, age 76, both hemispheres 23.1
Hippocampus, CA3
nTPM: 30.1
2436 Male, age 74, both hemispheres 52.2
1867 Male, age 76, both hemispheres 31.0
1891 Female, age 85, both hemispheres 28.2
2137 Male, age 80, left hemisphere 27.2
2620 Female, age 94, left hemisphere 24.5
2861 Female, age 67, both hemispheres 17.2
Parahippocampal cortex
nTPM: 34.8
2692 Male, age 74, both hemispheres 47.7
2250 Female, age 67, right hemisphere 44.0
1933 Female, age 85, both hemispheres 43.2
2622 Female, age 67, right hemisphere 38.5
2018 Male, age 76, both hemispheres 32.8
1990 Female, age 91, right hemisphere 31.3
2245 Female, age 91, both hemispheres 30.2
2693 Female, age 94, both hemispheres 28.9
1850 Male, age 80, both hemispheres 27.9
2532 Female, age 72, left hemisphere 23.7
Perirhinal gyrus
nTPM: 29.7
1841 Female, age 85, right hemisphere 34.4
2521 Female, age 94, right hemisphere 33.6
1847 Female, age 91, left hemisphere 32.0
1794 Male, age 80, right hemisphere 27.2
2848 Male, age 76, right hemisphere 21.3
Subiculum
nTPM: 35.8
2619 Male, age 74, both hemispheres 54.4
2729 Female, age 91, right hemisphere 41.1
2438 Female, age 94, left hemisphere 33.4
2042 Male, age 76, both hemispheres 30.9
1977 Female, age 85, both hemispheres 29.9
1901 Male, age 80, both hemispheres 24.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.7
Samples: 197

Max nTPM: 72.9
Min nTPM: 5.0
Std nTPM: 12.6
Median nTPM: 21.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 72.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 67.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 64.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 57.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 56.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 55.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 53.1
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 53.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 52.6
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 48.0
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 46.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.0
FF:10153-102I9 76 years, female 70.6
FF:10169-103B7 60 years, female 39.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.1
Pig sample Sample description nTPM
Subiculum
nTPM: 36.0
Samples: 4

Max nTPM: 36.6
Min nTPM: 34.9
Sample A Female 36.2
Sample B Female 36.6
Sample C Male 34.9
Sample D Male 36.3
Dorsal hippocampus
nTPM: 36.1
Samples: 4

Max nTPM: 56.4
Min nTPM: 25.0
Sample A Female 28.4
Sample B Female 34.5
Sample C Male 25.0
Sample D Male 56.4
Entorhinal cortex
nTPM: 27.0
Samples: 4

Max nTPM: 32.3
Min nTPM: 18.3
Sample A Female 28.5
Sample B Female 28.8
Sample C Male 32.3
Sample D Male 18.3
Ventral hippocampus
nTPM: 32.2
Samples: 4

Max nTPM: 43.0
Min nTPM: 23.1
Sample A Female 24.3
Sample B Female 38.3
Sample C Male 43.0
Sample D Male 23.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.4
Samples: 4

Max nTPM: 34.5
Min nTPM: 28.5
Sample A Male 28.5
Sample B Male 28.5
Sample C Female 30.2
Sample D Female 34.5
Hippocampal formation
nTPM: 25.5
Samples: 4

Max nTPM: 28.6
Min nTPM: 21.7
Sample A Male 27.7
Sample B Male 24.1
Sample C Female 21.7
Sample D Female 28.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
69012849 Antisense, RP_050309_01_F03, Mouse strain C57BL/6J (56 days, male) 0.3
72080155 Antisense, RP_051017_03_C11, Mouse strain C57BL/6J (56 days, male) 0.3

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