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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
179.6
nTPM
Monaco:
81.2
nTPM
Schmiedel:
45.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
179.6
HPA sample
nTPM
gdT-cell nTPM: 55.4
Samples: 6
Max nTPM: 70.9
Min nTPM: 37.8
P10809_1007
37.8
P10809_1022
56.1
P10809_1041
70.9
P10809_1060
57.3
P10809_1077
58.9
P10809_1098
51.5
MAIT T-cell nTPM: 66.9
Samples: 6
Max nTPM: 80.6
Min nTPM: 40.3
P10809_1006
40.3
P10809_1024
70.2
P10809_1043
72.8
P10809_1062
70.1
P10809_1083
67.5
P10809_1097
80.6
Memory CD4 T-cell nTPM: 98.1
Samples: 6
Max nTPM: 105.0
Min nTPM: 78.8
P10809_1014
78.8
P10809_1026
104.8
P10809_1045
104.3
P10809_1064
98.8
P10809_1086
97.0
P10809_1113
105.0
Memory CD8 T-cell nTPM: 76.9
Samples: 5
Max nTPM: 90.0
Min nTPM: 67.3
P10809_1012
67.3
P10809_1027
71.7
P10809_1046
69.5
P10809_1065
85.9
P10809_1111
90.0
Naive CD4 T-cell nTPM: 59.7
Samples: 6
Max nTPM: 73.2
Min nTPM: 50.9
P10809_1015
50.9
P10809_1030
65.7
P10809_1049
73.2
P10809_1068
53.5
P10809_1085
59.2
P10809_1112
55.6
Naive CD8 T-cell nTPM: 62.2
Samples: 6
Max nTPM: 71.0
Min nTPM: 49.1
P10809_1016
49.1
P10809_1031
71.0
P10809_1050
69.4
P10809_1069
61.8
P10809_1087
59.0
P10809_1110
62.6
T-reg nTPM: 179.6
Samples: 6
Max nTPM: 204.8
Min nTPM: 140.6
P10809_1018
140.6
P10809_1037
176.8
P10809_1056
191.1
P10809_1075
200.0
P10809_1094
204.8
P10809_1106
164.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
81.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 43.1
Samples: 4
Max nTPM: 63.5
Min nTPM: 32.7
RHH5202_R3573
39.3
RHH5230_R3602
32.7
RHH5259_R3631
36.7
RHH5288_R3660
63.5
Effector memory CD8 T-cell nTPM: 42.0
Samples: 4
Max nTPM: 55.5
Min nTPM: 31.3
RHH5203_R3574
55.5
RHH5231_R3603
48.7
RHH5260_R3632
32.3
RHH5289_R3661
31.3
MAIT T-cell nTPM: 31.2
Samples: 4
Max nTPM: 38.2
Min nTPM: 20.9
RHH5233_R3605
38.2
RHH5205_R3576
20.9
RHH5262_R3634
31.0
RHH5297_R3663
34.7
Memory CD4 T-cell TFH nTPM: 70.8
Samples: 4
Max nTPM: 85.6
Min nTPM: 63.5
RHH5300_R3666
63.5
RHH5236_R3608
85.6
RHH5265_R3637
66.3
RHH5208_R3579
67.9
Memory CD4 T-cell Th1 nTPM: 60.8
Samples: 4
Max nTPM: 110.3
Min nTPM: 38.4
RHH5210_R3581
45.3
RHH5302_R3668
110.3
RHH5238_R3610
38.4
RHH5267_R3639
49.2
Memory CD4 T-cell Th1/Th17 nTPM: 50.5
Samples: 4
Max nTPM: 80.8
Min nTPM: 31.5
RHH5303_R3669
80.8
RHH5211_R3582
48.3
RHH5239_R3611
31.5
RHH5268_R3640
41.3
Memory CD4 T-cell Th17 nTPM: 45.1
Samples: 4
Max nTPM: 54.8
Min nTPM: 29.0
RHH5304_R3670
53.9
RHH5212_R3583
54.8
RHH5240_R3612
42.7
RHH5269_R3641
29.0
Memory CD4 T-cell Th2 nTPM: 57.1
Samples: 4
Max nTPM: 66.8
Min nTPM: 42.9
RHH5305_R3671
66.8
RHH5213_R3584
56.7
RHH5241_R3613
62.0
RHH5270_R3642
42.9
Naive CD4 T-cell nTPM: 39.5
Samples: 4
Max nTPM: 49.9
Min nTPM: 25.8
RHH5306_R3672
49.9
RHH5214_R3585
49.9
RHH5242_R3614
32.3
RHH5271_R3643
25.8
Naive CD8 T-cell nTPM: 34.3
Samples: 4
Max nTPM: 51.3
Min nTPM: 18.8
RHH5201_R3572
51.3
RHH5229_R3601
18.8
RHH5258_R3630
41.5
RHH5287_R3659
25.5
Non-Vd2 gdTCR nTPM: 42.9
Samples: 4
Max nTPM: 70.3
Min nTPM: 23.1
RHH5235_R3607
25.7
RHH5264_R3636
70.3
RHH5207_R3578
23.1
RHH5299_R3665
52.6
T-reg nTPM: 81.2
Samples: 4
Max nTPM: 110.9
Min nTPM: 54.4
RHH5301_R3667
92.6
RHH5237_R3609
110.9
RHH5266_R3638
54.4
RHH5209_R3580
66.9
Terminal effector memory CD4 T-cell nTPM: 36.5
Samples: 2
Max nTPM: 43.6
Min nTPM: 29.4
RHH5243_R3615
29.4
RHH5272_R3644
43.6
Terminal effector memory CD8 T-cell nTPM: 42.3
Samples: 4
Max nTPM: 53.6
Min nTPM: 27.6
RHH5232_R3604
41.1
RHH5204_R3575
53.6
RHH5261_R3633
27.6
RHH5296_R3662
47.0
Vd2 gdTCR nTPM: 38.6
Samples: 4
Max nTPM: 59.6
Min nTPM: 23.8
RHH5234_R3606
23.8
RHH5206_R3577
45.4
RHH5263_R3635
25.4
RHH5298_R3664
59.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
