HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:164.9 nTPM
HPA Brain:101.4 nTPM
GTEx:164.9 nTPM
FANTOM5:128.6 Scaled Tags Per Million
Pig:100.6 nTPM
Mouse:141.8 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030180Antibody CAB018632
Glial cells Not detectedNot detected
Neuronal cells LowNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 101.4
Sample id Sample description nTPM
Hippocampus
nTPM: 77.7
1898 Male, age 80, left hemisphere 132.1
1855 Male, age 76, left hemisphere 98.3
2529 Female, age 94, left hemisphere 67.4
2621 Female, age 67, right hemisphere 59.2
2148 Female, age 91, left hemisphere 56.0
1911 Female, age 85, right hemisphere 53.1
Dentate gyrus
nTPM: 69.1
2010 Male, age 76, both hemispheres 113.9
1927 Female, age 91, both hemispheres 92.5
2246 Female, age 85, both hemispheres 69.4
2530 Female, age 94, left hemisphere 62.5
2528 Male, age 74, both hemispheres 39.6
2531 Female, age 67, both hemispheres 36.6
Entorhinal gyrus
nTPM: 58.5
2764 Male, age 80, right hemisphere 67.2
1938 Female, age 85, left hemisphere 66.1
2117 Female, age 91, right hemisphere 64.7
1787 Male, age 76, left hemisphere 64.5
2686 Male, age 75, right hemisphere 60.4
2613 Female, age 94, left hemisphere 28.0
Hippocampus, CA1
nTPM: 82.4
1873 Female, age 85, both hemispheres 103.4
2749 Male, age 80, left hemisphere 96.4
2045 Male, age 76, both hemispheres 89.0
2082 Female, age 91, right hemisphere 70.0
2527 Male, age 74, both hemispheres 53.3
Hippocampus, CA2
nTPM: 89.0
1892 Male, age 76, both hemispheres 122.9
1963 Male, age 80, left hemisphere 122.3
1940 Female, age 85, left hemisphere 96.5
2113 Female, age 91, right hemisphere 78.1
2437 Female, age 94, left hemisphere 57.4
2249 Male, age 74, both hemispheres 56.7
Hippocampus, CA3
nTPM: 66.1
2436 Male, age 74, both hemispheres 88.8
1867 Male, age 76, both hemispheres 76.3
2137 Male, age 80, left hemisphere 66.3
2861 Female, age 67, both hemispheres 59.6
2620 Female, age 94, left hemisphere 59.4
1891 Female, age 85, both hemispheres 45.9
Parahippocampal cortex
nTPM: 73.3
2245 Female, age 91, both hemispheres 112.9
2250 Female, age 67, right hemisphere 99.2
1933 Female, age 85, both hemispheres 89.5
2018 Male, age 76, both hemispheres 78.2
1850 Male, age 80, both hemispheres 67.5
1990 Female, age 91, right hemisphere 67.2
2693 Female, age 94, both hemispheres 66.5
2532 Female, age 72, left hemisphere 62.5
2622 Female, age 67, right hemisphere 47.8
2692 Male, age 74, both hemispheres 41.6
Perirhinal gyrus
nTPM: 101.4
1847 Female, age 91, left hemisphere 124.4
1841 Female, age 85, right hemisphere 115.7
1794 Male, age 80, right hemisphere 107.2
2521 Female, age 94, right hemisphere 90.4
2848 Male, age 76, right hemisphere 69.1
Subiculum
nTPM: 55.9
1977 Female, age 85, both hemispheres 91.7
1901 Male, age 80, both hemispheres 54.0
2619 Male, age 74, both hemispheres 49.1
2438 Female, age 94, left hemisphere 48.1
2729 Female, age 91, right hemisphere 47.2
2042 Male, age 76, both hemispheres 45.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 164.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 164.9
Samples: 197

Max nTPM: 479.5
Min nTPM: 29.8
Std nTPM: 82.5
Median nTPM: 146.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 479.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 461.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 460.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 429.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 370.6
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 368.7
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 352.0
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 333.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 321.2
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 316.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 315.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 128.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 128.6
FF:10169-103B7 60 years, female 183.8
FF:10153-102I9 76 years, female 73.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 100.6
Pig sample Sample description nTPM
Subiculum
nTPM: 95.6
Samples: 4

Max nTPM: 180.2
Min nTPM: 53.1
Sample A Female 64.7
Sample B Female 180.2
Sample C Male 53.1
Sample D Male 84.4
Dorsal hippocampus
nTPM: 100.6
Samples: 4

Max nTPM: 149.9
Min nTPM: 73.0
Sample A Female 86.8
Sample B Female 149.9
Sample C Male 73.0
Sample D Male 92.8
Entorhinal cortex
nTPM: 83.1
Samples: 4

Max nTPM: 172.1
Min nTPM: 31.4
Sample A Female 31.4
Sample B Female 172.1
Sample C Male 54.6
Sample D Male 74.4
Ventral hippocampus
nTPM: 92.2
Samples: 4

Max nTPM: 153.5
Min nTPM: 56.2
Sample A Female 56.2
Sample B Female 153.5
Sample C Male 58.7
Sample D Male 100.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 141.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 101.4
Samples: 4

Max nTPM: 122.0
Min nTPM: 91.7
Sample A Male 99.5
Sample B Male 91.7
Sample C Female 122.0
Sample D Female 92.3
Hippocampal formation
nTPM: 141.8
Samples: 4

Max nTPM: 154.0
Min nTPM: 127.9
Sample A Male 154.0
Sample B Male 133.6
Sample C Female 127.9
Sample D Female 151.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
79670592 Antisense, RP_071204_01_E01, Mouse strain C57BL/6J (56 days, male) 0.4
79556716 Antisense, RP_071204_01_E01, Mouse strain C57BL/6J (56 days, male) 0.3
2298 Antisense, RP_040604_01_D02, Mouse strain C57BL/6J (56 days, male) 0.0

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