HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:33.8 nTPM
HPA Brain:97.3 nTPM
GTEx:33.8 nTPM
FANTOM5:76.5 Scaled Tags Per Million
Pig:92.2 nTPM
Mouse:109.0 nTPM
Allen mouse:5.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA053880
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 97.3
Sample id Sample description nTPM
Hippocampus
nTPM: 34.0
1898 Male, age 80, left hemisphere 53.3
2621 Female, age 67, right hemisphere 39.6
1911 Female, age 85, right hemisphere 34.5
2529 Female, age 94, left hemisphere 34.2
2148 Female, age 91, left hemisphere 22.7
1855 Male, age 76, left hemisphere 19.6
Dentate gyrus
nTPM: 34.2
2528 Male, age 74, both hemispheres 41.9
2246 Female, age 85, both hemispheres 37.3
1927 Female, age 91, both hemispheres 37.1
2530 Female, age 94, left hemisphere 36.9
2010 Male, age 76, both hemispheres 26.8
2531 Female, age 67, both hemispheres 25.2
Entorhinal gyrus
nTPM: 69.0
2613 Female, age 94, left hemisphere 95.9
1787 Male, age 76, left hemisphere 73.2
1938 Female, age 85, left hemisphere 72.0
2764 Male, age 80, right hemisphere 70.4
2686 Male, age 75, right hemisphere 55.0
2117 Female, age 91, right hemisphere 47.6
Hippocampus, CA1
nTPM: 34.7
2749 Male, age 80, left hemisphere 61.2
2527 Male, age 74, both hemispheres 42.7
2082 Female, age 91, right hemisphere 28.4
1873 Female, age 85, both hemispheres 22.8
2045 Male, age 76, both hemispheres 18.3
Hippocampus, CA2
nTPM: 47.3
1892 Male, age 76, both hemispheres 69.6
2437 Female, age 94, left hemisphere 67.0
2249 Male, age 74, both hemispheres 51.0
2113 Female, age 91, right hemisphere 34.2
1940 Female, age 85, left hemisphere 32.6
1963 Male, age 80, left hemisphere 29.5
Hippocampus, CA3
nTPM: 42.4
1867 Male, age 76, both hemispheres 68.4
2137 Male, age 80, left hemisphere 57.3
1891 Female, age 85, both hemispheres 55.8
2436 Male, age 74, both hemispheres 36.3
2620 Female, age 94, left hemisphere 19.0
2861 Female, age 67, both hemispheres 17.4
Parahippocampal cortex
nTPM: 68.8
1990 Female, age 91, right hemisphere 115.0
1850 Male, age 80, both hemispheres 91.1
2245 Female, age 91, both hemispheres 71.6
2532 Female, age 72, left hemisphere 70.7
2693 Female, age 94, both hemispheres 68.3
2250 Female, age 67, right hemisphere 63.8
2692 Male, age 74, both hemispheres 62.6
2622 Female, age 67, right hemisphere 52.8
1933 Female, age 85, both hemispheres 48.9
2018 Male, age 76, both hemispheres 43.6
Perirhinal gyrus
nTPM: 97.3
1794 Male, age 80, right hemisphere 121.8
1841 Female, age 85, right hemisphere 102.1
1847 Female, age 91, left hemisphere 99.6
2521 Female, age 94, right hemisphere 88.7
2848 Male, age 76, right hemisphere 74.4
Subiculum
nTPM: 61.9
2438 Female, age 94, left hemisphere 93.0
1901 Male, age 80, both hemispheres 77.9
1977 Female, age 85, both hemispheres 73.6
2619 Male, age 74, both hemispheres 62.0
2042 Male, age 76, both hemispheres 42.3
2729 Female, age 91, right hemisphere 22.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.8
Samples: 197

Max nTPM: 139.4
Min nTPM: 8.4
Std nTPM: 20.9
Median nTPM: 27.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 139.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 129.8
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 117.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 112.5
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 97.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 93.0
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 91.0
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 88.1
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 87.0
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 86.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 83.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 76.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 76.5
FF:10169-103B7 60 years, female 84.1
FF:10153-102I9 76 years, female 68.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 92.2
Pig sample Sample description nTPM
Subiculum
nTPM: 58.2
Samples: 4

Max nTPM: 79.4
Min nTPM: 47.2
Sample A Female 79.4
Sample B Female 54.8
Sample C Male 47.2
Sample D Male 51.3
Dorsal hippocampus
nTPM: 63.3
Samples: 4

Max nTPM: 93.2
Min nTPM: 22.7
Sample A Female 91.4
Sample B Female 45.7
Sample C Male 93.2
Sample D Male 22.7
Entorhinal cortex
nTPM: 92.2
Samples: 4

Max nTPM: 108.6
Min nTPM: 70.5
Sample A Female 103.0
Sample B Female 108.6
Sample C Male 70.5
Sample D Male 86.5
Ventral hippocampus
nTPM: 52.3
Samples: 4

Max nTPM: 61.5
Min nTPM: 33.7
Sample A Female 60.6
Sample B Female 33.7
Sample C Male 61.5
Sample D Male 53.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 109.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 109.0
Samples: 4

Max nTPM: 126.9
Min nTPM: 95.3
Sample A Male 118.3
Sample B Male 126.9
Sample C Female 95.3
Sample D Female 95.6
Hippocampal formation
nTPM: 70.9
Samples: 4

Max nTPM: 76.4
Min nTPM: 64.6
Sample A Male 70.1
Sample B Male 64.6
Sample C Female 76.4
Sample D Female 72.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.6
68798370 Antisense, RP_050215_02_C11, Mouse strain C57BL/6J (56 days, male) 6.0
71064278 Antisense, RP_050725_03_D11, Mouse strain C57BL/6J (56 days, male) 5.3

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