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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
95.6
nTPM
GTEx:
95.6
nTPM
FANTOM5:
127.4
Scaled Tags Per Million
Pig:
9.8
nTPM
Mouse:
101.7
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
95.6
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 95.6
Samples: 105
Max nTPM: 192.1
Min nTPM: 44.6
Std nTPM: 29.6
Median nTPM:
99_1
64 years, male
192.1
447_1
81 years, male
170.6
317_1
60 years, male
154.2
379_1
60 years, male
151.3
347_1
72 years, male
151.0
355_1
70 years, female
151.0
452_1
88 years, female
148.4
243_1
75 years, male
140.2
349_1
83 years, male
138.1
351_1
91 years, male
135.4
354_1
81 years, female
133.6
173_1
67 years, male
132.1
356_1
87 years, female
131.4
177_1
74 years, male
131.3
394_1
75 years, female
128.5
172_1
72 years, female
127.8
120_1
70 years, female
127.5
42_1
85 years, male
127.3
115_1
83 years, male
127.0
386_1
76 years, male
124.7
218_1
71 years, female
121.4
506_1
65 years, male
120.9
384_1
83 years, male
119.8
41_1
94 years, female
119.5
375_1
74 years, female
118.8
265_1
87 years, male
117.6
352_1
62 years, male
117.6
321_1
62 years, female
115.2
109_1
81 years, female
113.3
319_1
81 years, male
110.6
6_1
73 years, female
110.5
350_1
84 years, female
110.1
353_1
82 years, female
110.0
163_1
78 years, male
105.9
229_1
69 years, female
103.6
9_1
66 years, female
103.2
404_1
82 years, female
101.9
396_1
62 years, male
100.7
189_1
76 years, male
100.5
425_1
59 years, female
100.2
237_1
82 years, male
98.5
35_1
74 years, female
98.3
254_1
77 years, female
98.0
335_1
73 years, female
97.6
377_1
82 years, female
96.2
376_1
75 years, female
94.9
119_1
70 years, female
94.6
153_1
70 years, female
94.3
264_1
73 years, female
93.3
526_1
61 years, male
93.3
324_1
76 years, male
93.2
389_1
86 years, female
92.4
266_1
85 years, male
91.6
503_1
68 years, male
91.6
246_1
77 years, male
91.1
117_1
61 years, male
90.9
291_1
76 years, male
89.7
286_1
68 years, female
89.5
315_1
62 years, female
89.2
348_1
84 years, male
89.2
295_1
61 years, female
88.0
307_1
66 years, female
87.9
406_1
79 years, male
87.2
4_1
88 years, female
86.7
142_1
61 years, female
85.8
145_1
84 years, male
84.9
318_1
68 years, male
84.5
137_1
83 years, male
82.9
293_1
68 years, female
82.4
517_1
88 years, male
82.0
313_1
79 years, female
81.8
314_1
67 years, male
80.3
17_1
71 years, male
79.2
251_1
78 years, male
79.1
292_1
71 years, male
78.7
2_1
77 years, female
77.9
480_1
63 years, male
77.6
320_1
89 years, female
77.4
18_1
88 years, male
77.1
126_1
63 years, male
76.9
311_1
78 years, male
76.2
405_1
91 years, male
75.9
468_1
89 years, male
75.8
499_1
55 years, female
74.1
32_1
67 years, male
73.6
322_1
76 years, male
73.3
308_1
70 years, female
71.1
162_1
79 years, female
64.5
415_1
77 years, female
61.6
316_1
62 years, male
60.7
89_1
63 years, male
60.6
217_1
76 years, male
59.5
81_1
67 years, male
59.3
139_1
64 years, female
58.5
414_1
84 years, female
58.4
288_1
66 years, female
57.6
518_1
75 years, female
54.3
491_1
89 years, female
53.2
413_1
59 years, female
47.3
466_1
57 years, female
47.1
495_1
57 years, female
47.1
490_1
67 years, female
46.5
149_1
88 years, male
46.1
501_1
88 years, male
44.7
43_1
64 years, female
44.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
