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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
102.2
nTPM
Monaco:
255.2
nTPM
Schmiedel:
367.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
102.2
HPA sample
nTPM
gdT-cell nTPM: 8.3
Samples: 6
Max nTPM: 13.4
Min nTPM: 5.7
P10809_1007
6.2
P10809_1022
5.7
P10809_1041
10.0
P10809_1060
8.4
P10809_1077
6.3
P10809_1098
13.4
MAIT T-cell nTPM: 50.7
Samples: 6
Max nTPM: 68.0
Min nTPM: 35.5
P10809_1006
58.8
P10809_1024
68.0
P10809_1043
35.7
P10809_1062
53.5
P10809_1083
52.5
P10809_1097
35.5
Memory CD4 T-cell nTPM: 54.6
Samples: 6
Max nTPM: 68.8
Min nTPM: 34.7
P10809_1014
68.8
P10809_1026
59.0
P10809_1045
59.1
P10809_1064
34.7
P10809_1086
47.1
P10809_1113
59.0
Memory CD8 T-cell nTPM: 26.1
Samples: 5
Max nTPM: 38.0
Min nTPM: 14.2
P10809_1012
38.0
P10809_1027
26.8
P10809_1046
17.7
P10809_1065
14.2
P10809_1111
33.7
Naive CD4 T-cell nTPM: 48.3
Samples: 6
Max nTPM: 54.8
Min nTPM: 38.2
P10809_1015
51.0
P10809_1030
54.8
P10809_1049
46.0
P10809_1068
46.5
P10809_1085
53.2
P10809_1112
38.2
Naive CD8 T-cell nTPM: 18.6
Samples: 6
Max nTPM: 27.9
Min nTPM: 8.6
P10809_1016
27.9
P10809_1031
21.2
P10809_1050
20.7
P10809_1069
16.0
P10809_1087
8.6
P10809_1110
17.1
T-reg nTPM: 102.2
Samples: 6
Max nTPM: 110.6
Min nTPM: 89.5
P10809_1018
110.6
P10809_1037
108.2
P10809_1056
108.9
P10809_1075
99.2
P10809_1094
96.8
P10809_1106
89.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
255.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 168.9
Samples: 4
Max nTPM: 184.4
Min nTPM: 139.4
RHH5202_R3573
171.9
RHH5230_R3602
184.4
RHH5259_R3631
139.4
RHH5288_R3660
180.0
Effector memory CD8 T-cell nTPM: 84.4
Samples: 4
Max nTPM: 144.6
Min nTPM: 53.6
RHH5203_R3574
144.6
RHH5231_R3603
53.6
RHH5260_R3632
63.9
RHH5289_R3661
75.4
MAIT T-cell nTPM: 161.3
Samples: 4
Max nTPM: 187.7
Min nTPM: 131.4
RHH5233_R3605
181.0
RHH5205_R3576
187.7
RHH5262_R3634
131.4
RHH5297_R3663
145.1
Memory CD4 T-cell TFH nTPM: 242.3
Samples: 4
Max nTPM: 282.9
Min nTPM: 188.8
RHH5300_R3666
258.7
RHH5236_R3608
188.8
RHH5265_R3637
238.8
RHH5208_R3579
282.9
Memory CD4 T-cell Th1 nTPM: 202.9
Samples: 4
Max nTPM: 224.6
Min nTPM: 174.8
RHH5210_R3581
174.8
RHH5302_R3668
224.6
RHH5238_R3610
219.2
RHH5267_R3639
193.1
Memory CD4 T-cell Th1/Th17 nTPM: 212.0
Samples: 4
Max nTPM: 266.9
Min nTPM: 139.8
RHH5303_R3669
202.2
RHH5211_R3582
266.9
RHH5239_R3611
239.2
RHH5268_R3640
139.8
Memory CD4 T-cell Th17 nTPM: 255.2
Samples: 4
Max nTPM: 279.2
Min nTPM: 236.3
RHH5304_R3670
238.1
RHH5212_R3583
267.2
RHH5240_R3612
279.2
RHH5269_R3641
236.3
Memory CD4 T-cell Th2 nTPM: 187.8
Samples: 4
Max nTPM: 225.1
Min nTPM: 165.4
RHH5305_R3671
184.9
RHH5213_R3584
225.1
RHH5241_R3613
175.7
RHH5270_R3642
165.4
Naive CD4 T-cell nTPM: 151.0
Samples: 4
Max nTPM: 174.5
Min nTPM: 122.3
RHH5306_R3672
148.5
RHH5214_R3585
158.8
RHH5242_R3614
122.3
RHH5271_R3643
174.5
Naive CD8 T-cell nTPM: 86.9
Samples: 4
Max nTPM: 94.7
Min nTPM: 69.9
RHH5201_R3572
94.1
RHH5229_R3601
88.9
RHH5258_R3630
69.9
RHH5287_R3659
94.7
Non-Vd2 gdTCR nTPM: 12.4
Samples: 4
Max nTPM: 14.8
Min nTPM: 9.6
RHH5235_R3607
14.4
RHH5264_R3636
9.6
RHH5207_R3578
14.8
RHH5299_R3665
10.7
T-reg nTPM: 187.0
Samples: 4
Max nTPM: 210.1
Min nTPM: 162.9
RHH5301_R3667
210.1
RHH5237_R3609
186.4
RHH5266_R3638
162.9
RHH5209_R3580
188.5
Terminal effector memory CD4 T-cell nTPM: 22.7
Samples: 2
Max nTPM: 38.7
Min nTPM: 6.7
RHH5243_R3615
6.7
RHH5272_R3644
38.7
Terminal effector memory CD8 T-cell nTPM: 10.8
Samples: 4
Max nTPM: 24.1
Min nTPM: 3.9
RHH5232_R3604
24.1
RHH5204_R3575
3.9
RHH5261_R3633
7.3
RHH5296_R3662
7.7
Vd2 gdTCR nTPM: 82.9
Samples: 4
Max nTPM: 114.1
Min nTPM: 20.4
RHH5234_R3606
114.1
RHH5206_R3577
20.4
RHH5263_R3635
104.1
RHH5298_R3664
92.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
