HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:11.5 nTPM
HPA Brain:23.9 nTPM
GTEx:11.5 nTPM
FANTOM5:17.9 Scaled Tags Per Million
Pig:11.2 nTPM
Mouse:9.7 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049449
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.9
Sample id Sample description nTPM
Hippocampus
nTPM: 17.5
2148 Female, age 91, left hemisphere 19.2
2621 Female, age 67, right hemisphere 18.7
1855 Male, age 76, left hemisphere 17.6
1911 Female, age 85, right hemisphere 16.9
1898 Male, age 80, left hemisphere 16.7
2529 Female, age 94, left hemisphere 15.9
Dentate gyrus
nTPM: 19.3
2531 Female, age 67, both hemispheres 22.5
2528 Male, age 74, both hemispheres 20.5
2246 Female, age 85, both hemispheres 19.4
1927 Female, age 91, both hemispheres 18.6
2010 Male, age 76, both hemispheres 18.4
2530 Female, age 94, left hemisphere 16.2
Entorhinal gyrus
nTPM: 18.8
2613 Female, age 94, left hemisphere 21.7
1787 Male, age 76, left hemisphere 20.3
2764 Male, age 80, right hemisphere 19.5
1938 Female, age 85, left hemisphere 17.7
2686 Male, age 75, right hemisphere 17.2
2117 Female, age 91, right hemisphere 16.4
Hippocampus, CA1
nTPM: 20.8
2749 Male, age 80, left hemisphere 28.0
2045 Male, age 76, both hemispheres 20.9
2082 Female, age 91, right hemisphere 19.7
2527 Male, age 74, both hemispheres 18.5
1873 Female, age 85, both hemispheres 17.1
Hippocampus, CA2
nTPM: 19.1
1940 Female, age 85, left hemisphere 23.0
1892 Male, age 76, both hemispheres 20.7
2113 Female, age 91, right hemisphere 18.6
2249 Male, age 74, both hemispheres 18.1
1963 Male, age 80, left hemisphere 17.8
2437 Female, age 94, left hemisphere 16.7
Hippocampus, CA3
nTPM: 23.9
2137 Male, age 80, left hemisphere 33.2
2620 Female, age 94, left hemisphere 27.0
2861 Female, age 67, both hemispheres 24.4
2436 Male, age 74, both hemispheres 22.3
1867 Male, age 76, both hemispheres 21.0
1891 Female, age 85, both hemispheres 15.6
Parahippocampal cortex
nTPM: 18.8
2622 Female, age 67, right hemisphere 22.9
2245 Female, age 91, both hemispheres 19.4
2693 Female, age 94, both hemispheres 19.2
2250 Female, age 67, right hemisphere 19.1
2532 Female, age 72, left hemisphere 19.0
1933 Female, age 85, both hemispheres 18.9
2018 Male, age 76, both hemispheres 18.5
2692 Male, age 74, both hemispheres 17.3
1850 Male, age 80, both hemispheres 17.1
1990 Female, age 91, right hemisphere 16.6
Perirhinal gyrus
nTPM: 19.3
1794 Male, age 80, right hemisphere 21.1
2521 Female, age 94, right hemisphere 21.1
1847 Female, age 91, left hemisphere 19.7
2848 Male, age 76, right hemisphere 17.6
1841 Female, age 85, right hemisphere 17.0
Subiculum
nTPM: 17.1
1901 Male, age 80, both hemispheres 19.5
2729 Female, age 91, right hemisphere 18.2
1977 Female, age 85, both hemispheres 17.2
2619 Male, age 74, both hemispheres 17.0
2042 Male, age 76, both hemispheres 16.0
2438 Female, age 94, left hemisphere 15.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.5
Samples: 197

Max nTPM: 24.2
Min nTPM: 4.7
Std nTPM: 3.0
Median nTPM: 11.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 24.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 18.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 18.6
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 18.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 17.7
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 16.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 16.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 16.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 16.0
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 15.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 15.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.9
FF:10153-102I9 76 years, female 23.4
FF:10169-103B7 60 years, female 12.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.2
Pig sample Sample description nTPM
Subiculum
nTPM: 7.4
Samples: 4

Max nTPM: 8.4
Min nTPM: 6.8
Sample A Female 8.4
Sample B Female 7.2
Sample C Male 6.8
Sample D Male 7.1
Dorsal hippocampus
nTPM: 11.2
Samples: 4

Max nTPM: 14.4
Min nTPM: 6.4
Sample A Female 11.6
Sample B Female 14.4
Sample C Male 6.4
Sample D Male 12.4
Entorhinal cortex
nTPM: 7.1
Samples: 4

Max nTPM: 8.3
Min nTPM: 6.3
Sample A Female 7.2
Sample B Female 6.3
Sample C Male 8.3
Sample D Male 6.5
Ventral hippocampus
nTPM: 9.8
Samples: 4

Max nTPM: 10.9
Min nTPM: 7.9
Sample A Female 10.3
Sample B Female 7.9
Sample C Male 10.9
Sample D Male 10.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.7
Samples: 4

Max nTPM: 10.3
Min nTPM: 8.8
Sample A Male 9.7
Sample B Male 10.3
Sample C Female 9.9
Sample D Female 8.8
Hippocampal formation
nTPM: 9.8
Samples: 4

Max nTPM: 10.7
Min nTPM: 8.1
Sample A Male 8.1
Sample B Male 10.7
Sample C Female 10.0
Sample D Female 10.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
69236646 Antisense, RP_050329_04_B02, Mouse strain C57BL/6J (56 days, male) 2.1

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