HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:27.8 nTPM
HPA Brain:68.6 nTPM
GTEx:27.8 nTPM
FANTOM5:32.4 Scaled Tags Per Million
Pig:34.8 nTPM
Mouse:38.0 nTPM
Allen mouse:9.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022840Antibody HPA022842
Glial cells MediumNot detected
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 68.6
Sample id Sample description nTPM
Hippocampus
nTPM: 68.0
1898 Male, age 80, left hemisphere 74.7
2148 Female, age 91, left hemisphere 72.9
2529 Female, age 94, left hemisphere 67.9
1855 Male, age 76, left hemisphere 66.2
2621 Female, age 67, right hemisphere 64.5
1911 Female, age 85, right hemisphere 61.7
Dentate gyrus
nTPM: 64.8
2531 Female, age 67, both hemispheres 69.0
1927 Female, age 91, both hemispheres 68.3
2528 Male, age 74, both hemispheres 67.2
2010 Male, age 76, both hemispheres 63.6
2246 Female, age 85, both hemispheres 61.5
2530 Female, age 94, left hemisphere 59.3
Entorhinal gyrus
nTPM: 68.4
2613 Female, age 94, left hemisphere 76.3
2764 Male, age 80, right hemisphere 73.9
1938 Female, age 85, left hemisphere 69.7
1787 Male, age 76, left hemisphere 64.4
2686 Male, age 75, right hemisphere 64.2
2117 Female, age 91, right hemisphere 61.7
Hippocampus, CA1
nTPM: 68.6
2749 Male, age 80, left hemisphere 78.0
1873 Female, age 85, both hemispheres 67.6
2527 Male, age 74, both hemispheres 67.0
2045 Male, age 76, both hemispheres 66.5
2082 Female, age 91, right hemisphere 64.0
Hippocampus, CA2
nTPM: 64.8
1963 Male, age 80, left hemisphere 79.3
1892 Male, age 76, both hemispheres 68.2
2437 Female, age 94, left hemisphere 62.6
2113 Female, age 91, right hemisphere 62.5
2249 Male, age 74, both hemispheres 60.7
1940 Female, age 85, left hemisphere 55.6
Hippocampus, CA3
nTPM: 66.6
2137 Male, age 80, left hemisphere 71.7
2620 Female, age 94, left hemisphere 69.8
2861 Female, age 67, both hemispheres 68.8
2436 Male, age 74, both hemispheres 66.6
1867 Male, age 76, both hemispheres 64.2
1891 Female, age 85, both hemispheres 58.6
Parahippocampal cortex
nTPM: 61.9
1850 Male, age 80, both hemispheres 70.8
2245 Female, age 91, both hemispheres 68.5
2622 Female, age 67, right hemisphere 62.9
1933 Female, age 85, both hemispheres 62.6
2532 Female, age 72, left hemisphere 62.4
1990 Female, age 91, right hemisphere 62.2
2692 Male, age 74, both hemispheres 60.2
2250 Female, age 67, right hemisphere 57.7
2693 Female, age 94, both hemispheres 56.0
2018 Male, age 76, both hemispheres 55.3
Perirhinal gyrus
nTPM: 66.3
1847 Female, age 91, left hemisphere 75.3
1794 Male, age 80, right hemisphere 70.3
2848 Male, age 76, right hemisphere 63.3
2521 Female, age 94, right hemisphere 61.3
1841 Female, age 85, right hemisphere 61.0
Subiculum
nTPM: 60.8
1977 Female, age 85, both hemispheres 65.0
2619 Male, age 74, both hemispheres 62.1
2729 Female, age 91, right hemisphere 61.8
1901 Male, age 80, both hemispheres 61.5
2438 Female, age 94, left hemisphere 58.5
2042 Male, age 76, both hemispheres 55.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.8
Samples: 197

Max nTPM: 47.7
Min nTPM: 15.3
Std nTPM: 6.3
Median nTPM: 27.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 47.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 45.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 42.3
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 41.9
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 41.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 40.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 40.5
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 40.1
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 39.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 39.7
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 39.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.4
FF:10153-102I9 76 years, female 40.0
FF:10169-103B7 60 years, female 24.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.8
Pig sample Sample description nTPM
Subiculum
nTPM: 31.7
Samples: 4

Max nTPM: 39.3
Min nTPM: 27.9
Sample A Female 39.3
Sample B Female 27.9
Sample C Male 30.6
Sample D Male 29.0
Dorsal hippocampus
nTPM: 33.0
Samples: 4

Max nTPM: 38.8
Min nTPM: 28.1
Sample A Female 38.8
Sample B Female 35.7
Sample C Male 29.2
Sample D Male 28.1
Entorhinal cortex
nTPM: 29.1
Samples: 4

Max nTPM: 32.6
Min nTPM: 26.3
Sample A Female 32.6
Sample B Female 26.3
Sample C Male 29.3
Sample D Male 28.2
Ventral hippocampus
nTPM: 34.8
Samples: 4

Max nTPM: 42.1
Min nTPM: 25.4
Sample A Female 35.4
Sample B Female 25.4
Sample C Male 42.1
Sample D Male 36.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 38.0
Samples: 4

Max nTPM: 39.2
Min nTPM: 36.9
Sample A Male 37.5
Sample B Male 38.3
Sample C Female 39.2
Sample D Female 36.9
Hippocampal formation
nTPM: 34.1
Samples: 4

Max nTPM: 36.5
Min nTPM: 31.5
Sample A Male 36.5
Sample B Male 33.9
Sample C Female 31.5
Sample D Female 34.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.5
67815544 Antisense, RP_040920_01_H04, Mouse strain C57BL/6J (56 days, male) 9.5

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