HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:0.1 nTPM
HPA Brain:39.7 nTPM
GTEx:0.1 nTPM
FANTOM5:8.5 Scaled Tags Per Million
Pig:34.2 nTPM
Mouse:15.5 nTPM
Allen mouse:9.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.7
Sample id Sample description nTPM
Hippocampus
nTPM: 21.2
2621 Female, age 67, right hemisphere 42.2
2148 Female, age 91, left hemisphere 24.7
1855 Male, age 76, left hemisphere 19.6
1911 Female, age 85, right hemisphere 18.9
2529 Female, age 94, left hemisphere 11.0
1898 Male, age 80, left hemisphere 10.5
Dentate gyrus
nTPM: 34.3
1927 Female, age 91, both hemispheres 48.3
2531 Female, age 67, both hemispheres 37.0
2246 Female, age 85, both hemispheres 36.0
2010 Male, age 76, both hemispheres 35.6
2528 Male, age 74, both hemispheres 28.1
2530 Female, age 94, left hemisphere 20.9
Entorhinal gyrus
nTPM: 4.9
2613 Female, age 94, left hemisphere 9.0
1787 Male, age 76, left hemisphere 6.5
1938 Female, age 85, left hemisphere 4.4
2686 Male, age 75, right hemisphere 3.7
2764 Male, age 80, right hemisphere 3.6
2117 Female, age 91, right hemisphere 2.1
Hippocampus, CA1
nTPM: 39.7
2749 Male, age 80, left hemisphere 62.8
2045 Male, age 76, both hemispheres 50.3
1873 Female, age 85, both hemispheres 35.3
2527 Male, age 74, both hemispheres 26.6
2082 Female, age 91, right hemisphere 23.3
Hippocampus, CA2
nTPM: 15.6
1892 Male, age 76, both hemispheres 46.5
1963 Male, age 80, left hemisphere 22.1
2249 Male, age 74, both hemispheres 11.5
2437 Female, age 94, left hemisphere 5.7
2113 Female, age 91, right hemisphere 4.6
1940 Female, age 85, left hemisphere 3.2
Hippocampus, CA3
nTPM: 32.8
2620 Female, age 94, left hemisphere 65.0
2137 Male, age 80, left hemisphere 39.0
2861 Female, age 67, both hemispheres 33.7
1867 Male, age 76, both hemispheres 30.7
1891 Female, age 85, both hemispheres 16.9
2436 Male, age 74, both hemispheres 11.5
Parahippocampal cortex
nTPM: 6.3
2018 Male, age 76, both hemispheres 10.9
2250 Female, age 67, right hemisphere 10.3
1933 Female, age 85, both hemispheres 7.1
1990 Female, age 91, right hemisphere 6.7
2245 Female, age 91, both hemispheres 6.0
2693 Female, age 94, both hemispheres 5.9
2532 Female, age 72, left hemisphere 5.5
2692 Male, age 74, both hemispheres 3.9
2622 Female, age 67, right hemisphere 3.7
1850 Male, age 80, both hemispheres 3.5
Perirhinal gyrus
nTPM: 5.8
2521 Female, age 94, right hemisphere 7.4
1847 Female, age 91, left hemisphere 7.1
1794 Male, age 80, right hemisphere 5.1
1841 Female, age 85, right hemisphere 4.9
2848 Male, age 76, right hemisphere 4.8
Subiculum
nTPM: 9.6
1977 Female, age 85, both hemispheres 18.4
1901 Male, age 80, both hemispheres 14.0
2042 Male, age 76, both hemispheres 8.9
2729 Female, age 91, right hemisphere 7.9
2438 Female, age 94, left hemisphere 4.4
2619 Male, age 74, both hemispheres 3.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 0.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 0.1
Samples: 197

Max nTPM: 1.7
Min nTPM: 0.0
Std nTPM: 0.2
Median nTPM: 0.0
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 1.7
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 1.3
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 1.2
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 1.1
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 1.1
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 1.0
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 0.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 0.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 0.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 0.7
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 0.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 8.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 8.5
FF:10169-103B7 60 years, female 11.4
FF:10153-102I9 76 years, female 5.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.2
Pig sample Sample description nTPM
Subiculum
nTPM: 13.7
Samples: 4

Max nTPM: 19.8
Min nTPM: 9.4
Sample A Female 11.9
Sample B Female 9.4
Sample C Male 19.8
Sample D Male 13.5
Dorsal hippocampus
nTPM: 34.3
Samples: 4

Max nTPM: 38.4
Min nTPM: 27.7
Sample A Female 38.4
Sample B Female 37.4
Sample C Male 27.7
Sample D Male 33.5
Entorhinal cortex
nTPM: 23.6
Samples: 4

Max nTPM: 24.9
Min nTPM: 20.7
Sample A Female 24.9
Sample B Female 20.7
Sample C Male 24.4
Sample D Male 24.5
Ventral hippocampus
nTPM: 31.9
Samples: 4

Max nTPM: 50.0
Min nTPM: 22.1
Sample A Female 22.1
Sample B Female 28.4
Sample C Male 27.0
Sample D Male 50.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.5
Samples: 4

Max nTPM: 10.7
Min nTPM: 6.2
Sample A Male 7.6
Sample B Male 6.2
Sample C Female 10.7
Sample D Female 9.5
Hippocampal formation
nTPM: 15.6
Samples: 4

Max nTPM: 18.6
Min nTPM: 11.5
Sample A Male 11.5
Sample B Male 18.6
Sample C Female 18.6
Sample D Female 13.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.8
70305622 Antisense, RP_050609_04_F09, Mouse strain C57BL/6J (56 days, male) 9.8
71924301 Antisense, RP_050609_04_F09, Mouse strain C57BL/6J (56 days, male) 5.6

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