HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:9.2 nTPM
HPA Brain:18.9 nTPM
GTEx:9.2 nTPM
FANTOM5:113.8 Scaled Tags Per Million
Pig:15.6 nTPM
Mouse:17.7 nTPM
Allen mouse:2.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.9
Sample id Sample description nTPM
Hippocampus
nTPM: 18.9
2529 Female, age 94, left hemisphere 25.2
2621 Female, age 67, right hemisphere 22.1
2148 Female, age 91, left hemisphere 18.0
1911 Female, age 85, right hemisphere 17.9
1855 Male, age 76, left hemisphere 15.7
1898 Male, age 80, left hemisphere 14.7
Dentate gyrus
nTPM: 15.9
2246 Female, age 85, both hemispheres 19.5
2530 Female, age 94, left hemisphere 18.4
2528 Male, age 74, both hemispheres 18.3
2531 Female, age 67, both hemispheres 15.2
2010 Male, age 76, both hemispheres 12.4
1927 Female, age 91, both hemispheres 11.9
Entorhinal gyrus
nTPM: 14.3
2117 Female, age 91, right hemisphere 16.3
1787 Male, age 76, left hemisphere 15.1
1938 Female, age 85, left hemisphere 15.1
2686 Male, age 75, right hemisphere 14.1
2764 Male, age 80, right hemisphere 13.7
2613 Female, age 94, left hemisphere 11.4
Hippocampus, CA1
nTPM: 15.2
2527 Male, age 74, both hemispheres 21.9
2082 Female, age 91, right hemisphere 16.4
1873 Female, age 85, both hemispheres 15.5
2045 Male, age 76, both hemispheres 12.5
2749 Male, age 80, left hemisphere 9.6
Hippocampus, CA2
nTPM: 14.8
2113 Female, age 91, right hemisphere 18.9
2249 Male, age 74, both hemispheres 17.5
2437 Female, age 94, left hemisphere 15.3
1940 Female, age 85, left hemisphere 15.1
1963 Male, age 80, left hemisphere 11.2
1892 Male, age 76, both hemispheres 10.7
Hippocampus, CA3
nTPM: 16.6
2861 Female, age 67, both hemispheres 21.5
2436 Male, age 74, both hemispheres 19.5
2620 Female, age 94, left hemisphere 16.8
1891 Female, age 85, both hemispheres 15.5
1867 Male, age 76, both hemispheres 14.8
2137 Male, age 80, left hemisphere 11.7
Parahippocampal cortex
nTPM: 15.9
2245 Female, age 91, both hemispheres 19.6
2622 Female, age 67, right hemisphere 18.5
1990 Female, age 91, right hemisphere 17.0
2018 Male, age 76, both hemispheres 16.6
2250 Female, age 67, right hemisphere 16.5
1850 Male, age 80, both hemispheres 15.5
2692 Male, age 74, both hemispheres 15.4
1933 Female, age 85, both hemispheres 14.5
2532 Female, age 72, left hemisphere 13.7
2693 Female, age 94, both hemispheres 12.1
Perirhinal gyrus
nTPM: 16.2
2521 Female, age 94, right hemisphere 18.6
1794 Male, age 80, right hemisphere 17.4
1841 Female, age 85, right hemisphere 17.1
1847 Female, age 91, left hemisphere 14.0
2848 Male, age 76, right hemisphere 14.0
Subiculum
nTPM: 16.3
2729 Female, age 91, right hemisphere 20.5
2619 Male, age 74, both hemispheres 18.5
2438 Female, age 94, left hemisphere 17.0
2042 Male, age 76, both hemispheres 16.1
1977 Female, age 85, both hemispheres 13.5
1901 Male, age 80, both hemispheres 11.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.2
Samples: 197

Max nTPM: 27.0
Min nTPM: 2.0
Std nTPM: 4.4
Median nTPM: 8.7
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 27.0
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 25.9
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 25.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 21.1
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 19.5
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 19.5
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 18.9
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 18.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 17.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 17.9
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 17.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 113.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 113.8
FF:10153-102I9 76 years, female 160.2
FF:10169-103B7 60 years, female 67.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.6
Pig sample Sample description nTPM
Subiculum
nTPM: 15.7
Samples: 4

Max nTPM: 30.4
Min nTPM: 3.2
Sample A Female 14.2
Sample B Female 3.2
Sample C Male 14.8
Sample D Male 30.4
Dorsal hippocampus
nTPM: 6.8
Samples: 4

Max nTPM: 8.5
Min nTPM: 5.3
Sample A Female 6.8
Sample B Female 5.3
Sample C Male 8.5
Sample D Male 6.6
Entorhinal cortex
nTPM: 14.2
Samples: 4

Max nTPM: 29.6
Min nTPM: 3.8
Sample A Female 29.6
Sample B Female 10.0
Sample C Male 13.2
Sample D Male 3.8
Ventral hippocampus
nTPM: 10.0
Samples: 4

Max nTPM: 18.6
Min nTPM: 6.3
Sample A Female 8.7
Sample B Female 6.3
Sample C Male 18.6
Sample D Male 6.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.5
Samples: 4

Max nTPM: 17.8
Min nTPM: 9.4
Sample A Male 11.7
Sample B Male 9.4
Sample C Female 15.2
Sample D Female 17.8
Hippocampal formation
nTPM: 17.7
Samples: 4

Max nTPM: 25.0
Min nTPM: 12.4
Sample A Male 12.4
Sample B Male 15.4
Sample C Female 18.1
Sample D Female 25.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.7
68637832 Antisense, RP_050126_01_F12, Mouse strain C57BL/6J (56 days, male) 2.7

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