HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:241.8 nTPM
HPA Brain:89.7 nTPM
GTEx:241.8 nTPM
FANTOM5:46.4 Scaled Tags Per Million
Pig:19.4 nTPM
Mouse:57.9 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019592Antibody CAB025494
Glial cells HighMedium
Neuronal cells HighLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 89.7
Sample id Sample description nTPM
Hippocampus
nTPM: 89.7
1855 Male, age 76, left hemisphere 101.5
1898 Male, age 80, left hemisphere 97.5
2529 Female, age 94, left hemisphere 92.4
2148 Female, age 91, left hemisphere 90.8
1911 Female, age 85, right hemisphere 84.6
2621 Female, age 67, right hemisphere 71.2
Dentate gyrus
nTPM: 62.7
2010 Male, age 76, both hemispheres 88.0
2246 Female, age 85, both hemispheres 70.0
2528 Male, age 74, both hemispheres 67.2
1927 Female, age 91, both hemispheres 56.0
2530 Female, age 94, left hemisphere 52.9
2531 Female, age 67, both hemispheres 42.4
Entorhinal gyrus
nTPM: 72.9
2117 Female, age 91, right hemisphere 92.9
1938 Female, age 85, left hemisphere 91.7
1787 Male, age 76, left hemisphere 87.1
2764 Male, age 80, right hemisphere 72.1
2686 Male, age 75, right hemisphere 59.9
2613 Female, age 94, left hemisphere 34.0
Hippocampus, CA1
nTPM: 89.3
2527 Male, age 74, both hemispheres 115.3
2082 Female, age 91, right hemisphere 96.2
2045 Male, age 76, both hemispheres 86.4
1873 Female, age 85, both hemispheres 81.1
2749 Male, age 80, left hemisphere 67.5
Hippocampus, CA2
nTPM: 72.2
2113 Female, age 91, right hemisphere 93.8
1940 Female, age 85, left hemisphere 85.3
2249 Male, age 74, both hemispheres 83.9
1892 Male, age 76, both hemispheres 61.7
1963 Male, age 80, left hemisphere 58.2
2437 Female, age 94, left hemisphere 50.2
Hippocampus, CA3
nTPM: 64.3
2436 Male, age 74, both hemispheres 84.4
1891 Female, age 85, both hemispheres 74.7
1867 Male, age 76, both hemispheres 70.0
2137 Male, age 80, left hemisphere 65.6
2861 Female, age 67, both hemispheres 56.8
2620 Female, age 94, left hemisphere 34.3
Parahippocampal cortex
nTPM: 80.2
2018 Male, age 76, both hemispheres 120.5
1933 Female, age 85, both hemispheres 92.5
2250 Female, age 67, right hemisphere 82.0
2692 Male, age 74, both hemispheres 79.3
2622 Female, age 67, right hemisphere 78.4
2245 Female, age 91, both hemispheres 76.4
1850 Male, age 80, both hemispheres 74.8
1990 Female, age 91, right hemisphere 68.4
2693 Female, age 94, both hemispheres 67.7
2532 Female, age 72, left hemisphere 61.7
Perirhinal gyrus
nTPM: 74.4
1847 Female, age 91, left hemisphere 89.4
1794 Male, age 80, right hemisphere 79.9
2521 Female, age 94, right hemisphere 77.4
1841 Female, age 85, right hemisphere 69.6
2848 Male, age 76, right hemisphere 55.8
Subiculum
nTPM: 81.2
2619 Male, age 74, both hemispheres 111.7
2729 Female, age 91, right hemisphere 95.9
2042 Male, age 76, both hemispheres 87.1
1977 Female, age 85, both hemispheres 75.9
1901 Male, age 80, both hemispheres 68.4
2438 Female, age 94, left hemisphere 48.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 241.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 241.8
Samples: 197

Max nTPM: 764.7
Min nTPM: 56.1
Std nTPM: 113.8
Median nTPM: 222.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 764.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 666.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 610.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 549.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 511.0
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 507.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 500.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 475.1
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 452.6
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 449.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 446.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.4
FF:10169-103B7 60 years, female 47.7
FF:10153-102I9 76 years, female 45.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.4
Pig sample Sample description nTPM
Subiculum
nTPM: 16.9
Samples: 4

Max nTPM: 20.0
Min nTPM: 12.5
Sample A Female 20.0
Sample B Female 19.9
Sample C Male 15.1
Sample D Male 12.5
Dorsal hippocampus
nTPM: 19.4
Samples: 4

Max nTPM: 28.1
Min nTPM: 10.1
Sample A Female 23.3
Sample B Female 16.1
Sample C Male 28.1
Sample D Male 10.1
Entorhinal cortex
nTPM: 13.0
Samples: 4

Max nTPM: 17.7
Min nTPM: 8.9
Sample A Female 8.9
Sample B Female 17.7
Sample C Male 14.9
Sample D Male 10.5
Ventral hippocampus
nTPM: 17.5
Samples: 4

Max nTPM: 21.3
Min nTPM: 12.8
Sample A Female 17.9
Sample B Female 17.8
Sample C Male 21.3
Sample D Male 12.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 57.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 54.9
Samples: 4

Max nTPM: 56.8
Min nTPM: 51.2
Sample A Male 55.7
Sample B Male 56.8
Sample C Female 55.9
Sample D Female 51.2
Hippocampal formation
nTPM: 57.9
Samples: 4

Max nTPM: 66.4
Min nTPM: 50.5
Sample A Male 66.4
Sample B Male 50.5
Sample C Female 61.8
Sample D Female 52.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71735833 Antisense, RP_051010_03_C07, Mouse strain C57BL/6J (56 days, male) 0.0

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