HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:24.0 nTPM
HPA Brain:38.4 nTPM
GTEx:24.0 nTPM
FANTOM5:49.9 Scaled Tags Per Million
Pig:32.5 nTPM
Mouse:36.8 nTPM
Allen mouse:7.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023447Antibody HPA023571Antibody HPA025941
Glial cells Not detectedNot detectedLow
Neuronal cells MediumHighMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 38.4
Sample id Sample description nTPM
Hippocampus
nTPM: 36.6
1898 Male, age 80, left hemisphere 40.8
2529 Female, age 94, left hemisphere 40.1
2148 Female, age 91, left hemisphere 38.5
2621 Female, age 67, right hemisphere 37.6
1911 Female, age 85, right hemisphere 31.8
1855 Male, age 76, left hemisphere 30.8
Dentate gyrus
nTPM: 34.4
2530 Female, age 94, left hemisphere 41.3
2531 Female, age 67, both hemispheres 36.7
2010 Male, age 76, both hemispheres 33.9
2246 Female, age 85, both hemispheres 32.6
1927 Female, age 91, both hemispheres 31.4
2528 Male, age 74, both hemispheres 30.7
Entorhinal gyrus
nTPM: 36.6
2686 Male, age 75, right hemisphere 39.9
1787 Male, age 76, left hemisphere 37.9
2764 Male, age 80, right hemisphere 37.0
1938 Female, age 85, left hemisphere 36.8
2117 Female, age 91, right hemisphere 35.9
2613 Female, age 94, left hemisphere 32.3
Hippocampus, CA1
nTPM: 36.2
2749 Male, age 80, left hemisphere 43.8
2527 Male, age 74, both hemispheres 38.5
1873 Female, age 85, both hemispheres 37.1
2045 Male, age 76, both hemispheres 31.3
2082 Female, age 91, right hemisphere 30.4
Hippocampus, CA2
nTPM: 36.7
1892 Male, age 76, both hemispheres 42.3
1963 Male, age 80, left hemisphere 40.1
1940 Female, age 85, left hemisphere 36.1
2437 Female, age 94, left hemisphere 35.1
2113 Female, age 91, right hemisphere 33.1
2249 Male, age 74, both hemispheres 33.1
Hippocampus, CA3
nTPM: 34.8
1867 Male, age 76, both hemispheres 38.5
2137 Male, age 80, left hemisphere 38.2
1891 Female, age 85, both hemispheres 36.4
2861 Female, age 67, both hemispheres 36.0
2620 Female, age 94, left hemisphere 30.8
2436 Male, age 74, both hemispheres 28.9
Parahippocampal cortex
nTPM: 35.0
1850 Male, age 80, both hemispheres 44.6
2245 Female, age 91, both hemispheres 38.6
2532 Female, age 72, left hemisphere 36.4
2018 Male, age 76, both hemispheres 34.3
2692 Male, age 74, both hemispheres 34.1
1933 Female, age 85, both hemispheres 33.9
2622 Female, age 67, right hemisphere 33.5
1990 Female, age 91, right hemisphere 33.4
2250 Female, age 67, right hemisphere 31.3
2693 Female, age 94, both hemispheres 30.2
Perirhinal gyrus
nTPM: 38.4
1794 Male, age 80, right hemisphere 46.8
1841 Female, age 85, right hemisphere 39.6
1847 Female, age 91, left hemisphere 38.6
2848 Male, age 76, right hemisphere 37.2
2521 Female, age 94, right hemisphere 29.8
Subiculum
nTPM: 36.4
2438 Female, age 94, left hemisphere 47.7
1901 Male, age 80, both hemispheres 38.0
1977 Female, age 85, both hemispheres 35.3
2042 Male, age 76, both hemispheres 33.0
2619 Male, age 74, both hemispheres 32.5
2729 Female, age 91, right hemisphere 32.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.0
Samples: 197

Max nTPM: 43.7
Min nTPM: 7.0
Std nTPM: 6.3
Median nTPM: 23.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 43.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 38.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 38.2
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 37.8
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 36.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 35.7
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 35.1
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 34.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 34.1
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 33.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 33.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.9
FF:10169-103B7 60 years, female 52.9
FF:10153-102I9 76 years, female 47.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.5
Pig sample Sample description nTPM
Subiculum
nTPM: 28.5
Samples: 4

Max nTPM: 33.7
Min nTPM: 25.4
Sample A Female 33.7
Sample B Female 26.9
Sample C Male 28.0
Sample D Male 25.4
Dorsal hippocampus
nTPM: 32.5
Samples: 4

Max nTPM: 36.2
Min nTPM: 28.4
Sample A Female 36.2
Sample B Female 32.4
Sample C Male 32.8
Sample D Male 28.4
Entorhinal cortex
nTPM: 27.0
Samples: 4

Max nTPM: 29.7
Min nTPM: 23.6
Sample A Female 28.0
Sample B Female 29.7
Sample C Male 26.7
Sample D Male 23.6
Ventral hippocampus
nTPM: 30.2
Samples: 4

Max nTPM: 33.9
Min nTPM: 25.9
Sample A Female 29.2
Sample B Female 25.9
Sample C Male 31.6
Sample D Male 33.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 36.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.2
Samples: 4

Max nTPM: 40.3
Min nTPM: 34.4
Sample A Male 35.7
Sample B Male 34.4
Sample C Female 34.4
Sample D Female 40.3
Hippocampal formation
nTPM: 36.8
Samples: 4

Max nTPM: 38.9
Min nTPM: 33.4
Sample A Male 36.0
Sample B Male 38.8
Sample C Female 38.9
Sample D Female 33.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.8
81600130 Antisense, RP_080312_02_F06, Mouse strain C57BL/6J (56 days, male) 10.0
69626754 Antisense, RP_050428_01_C06, Mouse strain C57BL/6J (56 days, male) 5.7

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