HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:180.2 nTPM
HPA Brain:124.7 nTPM
GTEx:180.2 nTPM
FANTOM5:70.4 Scaled Tags Per Million
Pig:18.6 nTPM
Mouse:168.8 nTPM
Allen mouse:14.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019601Antibody CAB008667
Glial cells LowNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 124.7
Sample id Sample description nTPM
Hippocampus
nTPM: 114.8
1898 Male, age 80, left hemisphere 148.5
2529 Female, age 94, left hemisphere 127.2
2148 Female, age 91, left hemisphere 113.6
2621 Female, age 67, right hemisphere 102.0
1911 Female, age 85, right hemisphere 101.8
1855 Male, age 76, left hemisphere 96.0
Dentate gyrus
nTPM: 113.4
2528 Male, age 74, both hemispheres 128.3
2530 Female, age 94, left hemisphere 124.5
2010 Male, age 76, both hemispheres 123.1
1927 Female, age 91, both hemispheres 110.3
2246 Female, age 85, both hemispheres 109.3
2531 Female, age 67, both hemispheres 84.8
Entorhinal gyrus
nTPM: 94.7
2117 Female, age 91, right hemisphere 114.6
1787 Male, age 76, left hemisphere 107.3
2764 Male, age 80, right hemisphere 101.8
1938 Female, age 85, left hemisphere 99.4
2686 Male, age 75, right hemisphere 73.4
2613 Female, age 94, left hemisphere 71.4
Hippocampus, CA1
nTPM: 124.7
2749 Male, age 80, left hemisphere 186.1
2527 Male, age 74, both hemispheres 129.8
1873 Female, age 85, both hemispheres 124.4
2082 Female, age 91, right hemisphere 93.6
2045 Male, age 76, both hemispheres 89.8
Hippocampus, CA2
nTPM: 112.5
1963 Male, age 80, left hemisphere 158.2
2249 Male, age 74, both hemispheres 139.4
2437 Female, age 94, left hemisphere 103.0
1892 Male, age 76, both hemispheres 94.0
2113 Female, age 91, right hemisphere 91.9
1940 Female, age 85, left hemisphere 88.6
Hippocampus, CA3
nTPM: 114.3
2436 Male, age 74, both hemispheres 161.0
2137 Male, age 80, left hemisphere 132.7
2620 Female, age 94, left hemisphere 102.4
1867 Male, age 76, both hemispheres 99.8
1891 Female, age 85, both hemispheres 97.7
2861 Female, age 67, both hemispheres 92.2
Parahippocampal cortex
nTPM: 84.4
1990 Female, age 91, right hemisphere 103.9
2250 Female, age 67, right hemisphere 99.3
2245 Female, age 91, both hemispheres 99.0
1933 Female, age 85, both hemispheres 93.9
2018 Male, age 76, both hemispheres 87.8
1850 Male, age 80, both hemispheres 83.0
2532 Female, age 72, left hemisphere 79.5
2622 Female, age 67, right hemisphere 71.1
2692 Male, age 74, both hemispheres 67.7
2693 Female, age 94, both hemispheres 58.3
Perirhinal gyrus
nTPM: 89.0
1794 Male, age 80, right hemisphere 101.8
1847 Female, age 91, left hemisphere 98.4
2521 Female, age 94, right hemisphere 89.7
1841 Female, age 85, right hemisphere 87.8
2848 Male, age 76, right hemisphere 67.1
Subiculum
nTPM: 97.3
1977 Female, age 85, both hemispheres 114.8
2729 Female, age 91, right hemisphere 101.6
1901 Male, age 80, both hemispheres 100.0
2619 Male, age 74, both hemispheres 97.9
2438 Female, age 94, left hemisphere 84.8
2042 Male, age 76, both hemispheres 84.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 180.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 180.2
Samples: 197

Max nTPM: 475.7
Min nTPM: 70.2
Std nTPM: 55.8
Median nTPM: 176.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 475.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 392.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 318.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 311.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 301.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 299.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 293.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 283.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 282.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 278.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 275.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 70.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.4
FF:10169-103B7 60 years, female 86.2
FF:10153-102I9 76 years, female 54.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.6
Pig sample Sample description nTPM
Subiculum
nTPM: 13.5
Samples: 4

Max nTPM: 14.2
Min nTPM: 13.1
Sample A Female 14.2
Sample B Female 13.1
Sample C Male 13.3
Sample D Male 13.5
Dorsal hippocampus
nTPM: 18.6
Samples: 4

Max nTPM: 22.7
Min nTPM: 16.1
Sample A Female 22.7
Sample B Female 16.8
Sample C Male 18.9
Sample D Male 16.1
Entorhinal cortex
nTPM: 16.6
Samples: 4

Max nTPM: 19.6
Min nTPM: 13.5
Sample A Female 14.6
Sample B Female 18.7
Sample C Male 19.6
Sample D Male 13.5
Ventral hippocampus
nTPM: 17.1
Samples: 4

Max nTPM: 24.6
Min nTPM: 13.1
Sample A Female 14.9
Sample B Female 13.1
Sample C Male 24.6
Sample D Male 15.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 168.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 122.2
Samples: 4

Max nTPM: 130.5
Min nTPM: 106.5
Sample A Male 126.9
Sample B Male 124.7
Sample C Female 130.5
Sample D Female 106.5
Hippocampal formation
nTPM: 168.8
Samples: 4

Max nTPM: 179.6
Min nTPM: 158.1
Sample A Male 159.9
Sample B Male 158.1
Sample C Female 179.6
Sample D Female 177.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.3
641541 Antisense, RP_040914_01_F12, Mouse strain C57BL/6J (56 days, male) 14.3

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