HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:25.3 nTPM
HPA Brain:19.7 nTPM
GTEx:25.3 nTPM
FANTOM5:10.5 Scaled Tags Per Million
Pig:60.2 nTPM
Mouse:3.7 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045215
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.7
Sample id Sample description nTPM
Hippocampus
nTPM: 19.7
1898 Male, age 80, left hemisphere 24.3
2529 Female, age 94, left hemisphere 21.8
2148 Female, age 91, left hemisphere 19.9
1855 Male, age 76, left hemisphere 17.7
2621 Female, age 67, right hemisphere 17.7
1911 Female, age 85, right hemisphere 16.8
Dentate gyrus
nTPM: 18.2
2530 Female, age 94, left hemisphere 20.2
2528 Male, age 74, both hemispheres 19.5
2531 Female, age 67, both hemispheres 19.2
1927 Female, age 91, both hemispheres 17.0
2010 Male, age 76, both hemispheres 16.7
2246 Female, age 85, both hemispheres 16.4
Entorhinal gyrus
nTPM: 18.8
2117 Female, age 91, right hemisphere 20.7
1787 Male, age 76, left hemisphere 20.1
1938 Female, age 85, left hemisphere 18.9
2613 Female, age 94, left hemisphere 18.9
2764 Male, age 80, right hemisphere 17.7
2686 Male, age 75, right hemisphere 16.4
Hippocampus, CA1
nTPM: 16.7
2527 Male, age 74, both hemispheres 18.9
1873 Female, age 85, both hemispheres 18.2
2082 Female, age 91, right hemisphere 16.6
2749 Male, age 80, left hemisphere 15.9
2045 Male, age 76, both hemispheres 14.0
Hippocampus, CA2
nTPM: 17.5
1963 Male, age 80, left hemisphere 21.2
2249 Male, age 74, both hemispheres 19.5
2437 Female, age 94, left hemisphere 16.8
2113 Female, age 91, right hemisphere 16.5
1940 Female, age 85, left hemisphere 16.3
1892 Male, age 76, both hemispheres 14.9
Hippocampus, CA3
nTPM: 17.3
2620 Female, age 94, left hemisphere 19.5
2436 Male, age 74, both hemispheres 18.6
2861 Female, age 67, both hemispheres 17.7
2137 Male, age 80, left hemisphere 16.3
1891 Female, age 85, both hemispheres 16.2
1867 Male, age 76, both hemispheres 15.6
Parahippocampal cortex
nTPM: 18.0
1933 Female, age 85, both hemispheres 21.2
2692 Male, age 74, both hemispheres 19.8
2532 Female, age 72, left hemisphere 18.7
1850 Male, age 80, both hemispheres 18.2
2622 Female, age 67, right hemisphere 18.2
2250 Female, age 67, right hemisphere 17.3
2245 Female, age 91, both hemispheres 17.0
2018 Male, age 76, both hemispheres 16.9
1990 Female, age 91, right hemisphere 16.6
2693 Female, age 94, both hemispheres 16.2
Perirhinal gyrus
nTPM: 16.8
1794 Male, age 80, right hemisphere 19.7
1847 Female, age 91, left hemisphere 17.2
2848 Male, age 76, right hemisphere 17.0
1841 Female, age 85, right hemisphere 15.9
2521 Female, age 94, right hemisphere 14.4
Subiculum
nTPM: 18.4
2619 Male, age 74, both hemispheres 22.2
2729 Female, age 91, right hemisphere 20.8
2042 Male, age 76, both hemispheres 19.4
1901 Male, age 80, both hemispheres 19.2
1977 Female, age 85, both hemispheres 17.7
2438 Female, age 94, left hemisphere 11.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.3
Samples: 197

Max nTPM: 54.4
Min nTPM: 13.0
Std nTPM: 7.4
Median nTPM: 23.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 54.4
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 50.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 48.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 47.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 46.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 42.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 42.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 42.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 41.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 40.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 39.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 10.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.5
FF:10153-102I9 76 years, female 11.7
FF:10169-103B7 60 years, female 9.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 60.2
Pig sample Sample description nTPM
Subiculum
nTPM: 48.7
Samples: 4

Max nTPM: 51.5
Min nTPM: 45.8
Sample A Female 48.4
Sample B Female 51.5
Sample C Male 45.8
Sample D Male 49.2
Dorsal hippocampus
nTPM: 60.2
Samples: 4

Max nTPM: 70.8
Min nTPM: 47.6
Sample A Female 70.8
Sample B Female 63.5
Sample C Male 47.6
Sample D Male 58.7
Entorhinal cortex
nTPM: 51.6
Samples: 4

Max nTPM: 55.3
Min nTPM: 47.4
Sample A Female 47.4
Sample B Female 52.1
Sample C Male 51.5
Sample D Male 55.3
Ventral hippocampus
nTPM: 52.2
Samples: 4

Max nTPM: 61.1
Min nTPM: 44.2
Sample A Female 61.1
Sample B Female 55.0
Sample C Male 48.5
Sample D Male 44.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 3.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.8
Samples: 4

Max nTPM: 3.4
Min nTPM: 2.0
Sample A Male 2.0
Sample B Male 2.7
Sample C Female 3.4
Sample D Female 2.9
Hippocampal formation
nTPM: 3.7
Samples: 4

Max nTPM: 4.2
Min nTPM: 3.2
Sample A Male 3.2
Sample B Male 3.8
Sample C Female 4.2
Sample D Female 3.4

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