HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:8.3 nTPM
HPA Brain:12.6 nTPM
GTEx:8.3 nTPM
FANTOM5:35.4 Scaled Tags Per Million
Pig:12.1 nTPM
Mouse:6.6 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037857Antibody HPA037858
Glial cells Not detectedNot detected
Neuronal cells LowLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.6
Sample id Sample description nTPM
Hippocampus
nTPM: 11.3
2529 Female, age 94, left hemisphere 12.7
2621 Female, age 67, right hemisphere 11.8
2148 Female, age 91, left hemisphere 11.3
1898 Male, age 80, left hemisphere 11.2
1855 Male, age 76, left hemisphere 10.7
1911 Female, age 85, right hemisphere 10.5
Dentate gyrus
nTPM: 12.6
2530 Female, age 94, left hemisphere 14.8
2528 Male, age 74, both hemispheres 12.9
2246 Female, age 85, both hemispheres 12.3
2531 Female, age 67, both hemispheres 12.3
2010 Male, age 76, both hemispheres 12.1
1927 Female, age 91, both hemispheres 11.0
Entorhinal gyrus
nTPM: 11.2
2686 Male, age 75, right hemisphere 13.5
2613 Female, age 94, left hemisphere 11.9
2117 Female, age 91, right hemisphere 10.8
1787 Male, age 76, left hemisphere 10.6
1938 Female, age 85, left hemisphere 10.4
2764 Male, age 80, right hemisphere 10.0
Hippocampus, CA1
nTPM: 12.5
2749 Male, age 80, left hemisphere 14.5
2082 Female, age 91, right hemisphere 13.4
2527 Male, age 74, both hemispheres 12.3
1873 Female, age 85, both hemispheres 11.5
2045 Male, age 76, both hemispheres 10.9
Hippocampus, CA2
nTPM: 12.2
1892 Male, age 76, both hemispheres 12.8
2249 Male, age 74, both hemispheres 12.8
2113 Female, age 91, right hemisphere 12.5
1940 Female, age 85, left hemisphere 12.0
2437 Female, age 94, left hemisphere 11.8
1963 Male, age 80, left hemisphere 11.3
Hippocampus, CA3
nTPM: 11.7
2137 Male, age 80, left hemisphere 12.5
2861 Female, age 67, both hemispheres 12.4
2436 Male, age 74, both hemispheres 12.3
2620 Female, age 94, left hemisphere 11.4
1867 Male, age 76, both hemispheres 11.3
1891 Female, age 85, both hemispheres 10.4
Parahippocampal cortex
nTPM: 11.7
2245 Female, age 91, both hemispheres 14.0
2532 Female, age 72, left hemisphere 13.0
2692 Male, age 74, both hemispheres 11.9
2250 Female, age 67, right hemisphere 11.7
2693 Female, age 94, both hemispheres 11.6
2622 Female, age 67, right hemisphere 11.5
1850 Male, age 80, both hemispheres 11.4
1933 Female, age 85, both hemispheres 11.1
1990 Female, age 91, right hemisphere 10.9
2018 Male, age 76, both hemispheres 9.8
Perirhinal gyrus
nTPM: 11.5
2848 Male, age 76, right hemisphere 12.1
1794 Male, age 80, right hemisphere 11.8
1841 Female, age 85, right hemisphere 11.8
2521 Female, age 94, right hemisphere 11.5
1847 Female, age 91, left hemisphere 10.2
Subiculum
nTPM: 10.5
2619 Male, age 74, both hemispheres 10.9
2438 Female, age 94, left hemisphere 10.8
2729 Female, age 91, right hemisphere 10.8
1901 Male, age 80, both hemispheres 10.7
1977 Female, age 85, both hemispheres 10.2
2042 Male, age 76, both hemispheres 9.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.3
Samples: 197

Max nTPM: 17.1
Min nTPM: 3.8
Std nTPM: 1.9
Median nTPM: 8.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 17.1
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 16.3
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 15.6
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 14.3
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 13.2
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 12.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 12.5
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 12.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 12.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 12.0
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 11.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.4
FF:10169-103B7 60 years, female 39.4
FF:10153-102I9 76 years, female 31.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.1
Pig sample Sample description nTPM
Subiculum
nTPM: 11.0
Samples: 4

Max nTPM: 16.1
Min nTPM: 8.1
Sample A Female 16.1
Sample B Female 10.3
Sample C Male 9.6
Sample D Male 8.1
Dorsal hippocampus
nTPM: 9.9
Samples: 4

Max nTPM: 11.3
Min nTPM: 8.2
Sample A Female 11.3
Sample B Female 10.4
Sample C Male 9.8
Sample D Male 8.2
Entorhinal cortex
nTPM: 12.1
Samples: 4

Max nTPM: 12.9
Min nTPM: 11.6
Sample A Female 12.2
Sample B Female 12.9
Sample C Male 11.6
Sample D Male 11.6
Ventral hippocampus
nTPM: 10.4
Samples: 4

Max nTPM: 12.2
Min nTPM: 9.2
Sample A Female 9.4
Sample B Female 9.2
Sample C Male 12.2
Sample D Male 10.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.8
Samples: 4

Max nTPM: 6.7
Min nTPM: 4.5
Sample A Male 4.5
Sample B Male 6.7
Sample C Female 6.0
Sample D Female 6.0
Hippocampal formation
nTPM: 6.6
Samples: 4

Max nTPM: 7.0
Min nTPM: 6.1
Sample A Male 6.6
Sample B Male 7.0
Sample C Female 6.6
Sample D Female 6.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
74821743 Antisense, RP_060321_02_C09, Mouse strain C57BL/6J (56 days, male) 0.1

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