HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:26.7 nTPM
HPA Brain:29.0 nTPM
GTEx:26.7 nTPM
FANTOM5:37.8 Scaled Tags Per Million
Pig:19.7 nTPM
Mouse:41.9 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043485Antibody HPA050334
Glial cells MediumNot detected
Neuronal cells HighMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.0
Sample id Sample description nTPM
Hippocampus
nTPM: 27.8
1898 Male, age 80, left hemisphere 30.9
2529 Female, age 94, left hemisphere 30.7
2621 Female, age 67, right hemisphere 29.5
1855 Male, age 76, left hemisphere 25.6
1911 Female, age 85, right hemisphere 25.6
2148 Female, age 91, left hemisphere 24.2
Dentate gyrus
nTPM: 25.3
2530 Female, age 94, left hemisphere 29.3
2010 Male, age 76, both hemispheres 26.5
2528 Male, age 74, both hemispheres 26.0
1927 Female, age 91, both hemispheres 25.5
2246 Female, age 85, both hemispheres 24.0
2531 Female, age 67, both hemispheres 20.3
Entorhinal gyrus
nTPM: 28.2
1938 Female, age 85, left hemisphere 31.9
2117 Female, age 91, right hemisphere 31.7
2764 Male, age 80, right hemisphere 29.4
2686 Male, age 75, right hemisphere 26.7
1787 Male, age 76, left hemisphere 26.6
2613 Female, age 94, left hemisphere 23.2
Hippocampus, CA1
nTPM: 24.5
2527 Male, age 74, both hemispheres 27.4
1873 Female, age 85, both hemispheres 25.0
2082 Female, age 91, right hemisphere 24.6
2749 Male, age 80, left hemisphere 24.3
2045 Male, age 76, both hemispheres 21.0
Hippocampus, CA2
nTPM: 27.2
2249 Male, age 74, both hemispheres 33.5
1940 Female, age 85, left hemisphere 27.3
1892 Male, age 76, both hemispheres 25.9
1963 Male, age 80, left hemisphere 25.7
2113 Female, age 91, right hemisphere 25.5
2437 Female, age 94, left hemisphere 25.3
Hippocampus, CA3
nTPM: 25.2
2436 Male, age 74, both hemispheres 27.1
2620 Female, age 94, left hemisphere 26.7
1891 Female, age 85, both hemispheres 26.6
2861 Female, age 67, both hemispheres 25.0
1867 Male, age 76, both hemispheres 23.5
2137 Male, age 80, left hemisphere 22.1
Parahippocampal cortex
nTPM: 26.2
1850 Male, age 80, both hemispheres 28.3
2250 Female, age 67, right hemisphere 27.2
2532 Female, age 72, left hemisphere 27.2
1990 Female, age 91, right hemisphere 26.3
1933 Female, age 85, both hemispheres 26.1
2245 Female, age 91, both hemispheres 26.1
2622 Female, age 67, right hemisphere 25.7
2692 Male, age 74, both hemispheres 25.3
2693 Female, age 94, both hemispheres 25.3
2018 Male, age 76, both hemispheres 24.2
Perirhinal gyrus
nTPM: 27.5
1794 Male, age 80, right hemisphere 29.5
1847 Female, age 91, left hemisphere 29.3
1841 Female, age 85, right hemisphere 28.1
2848 Male, age 76, right hemisphere 27.0
2521 Female, age 94, right hemisphere 23.6
Subiculum
nTPM: 29.0
2438 Female, age 94, left hemisphere 33.5
2042 Male, age 76, both hemispheres 29.9
1901 Male, age 80, both hemispheres 28.8
1977 Female, age 85, both hemispheres 28.2
2619 Male, age 74, both hemispheres 27.6
2729 Female, age 91, right hemisphere 26.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.7
Samples: 197

Max nTPM: 55.7
Min nTPM: 13.7
Std nTPM: 6.0
Median nTPM: 26.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 55.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 41.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 39.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 39.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 39.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 39.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 38.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 38.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 37.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 37.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 36.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.8
FF:10169-103B7 60 years, female 40.5
FF:10153-102I9 76 years, female 35.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.7
Pig sample Sample description nTPM
Subiculum
nTPM: 14.3
Samples: 4

Max nTPM: 18.7
Min nTPM: 12.4
Sample A Female 18.7
Sample B Female 13.3
Sample C Male 12.6
Sample D Male 12.4
Dorsal hippocampus
nTPM: 19.7
Samples: 4

Max nTPM: 28.2
Min nTPM: 14.0
Sample A Female 28.2
Sample B Female 17.7
Sample C Male 18.9
Sample D Male 14.0
Entorhinal cortex
nTPM: 14.8
Samples: 4

Max nTPM: 17.3
Min nTPM: 11.1
Sample A Female 16.1
Sample B Female 17.3
Sample C Male 14.8
Sample D Male 11.1
Ventral hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 20.8
Min nTPM: 11.0
Sample A Female 19.0
Sample B Female 11.0
Sample C Male 20.8
Sample D Male 16.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 41.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 35.7
Samples: 4

Max nTPM: 38.4
Min nTPM: 33.2
Sample A Male 36.3
Sample B Male 38.4
Sample C Female 34.8
Sample D Female 33.2
Hippocampal formation
nTPM: 41.9
Samples: 4

Max nTPM: 50.0
Min nTPM: 37.0
Sample A Male 50.0
Sample B Male 38.9
Sample C Female 37.0
Sample D Female 41.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
68410428 Antisense, RP_041214_01_H03, Mouse strain C57BL/6J (56 days, male) 1.6

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