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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
165.1
nTPM
Monaco:
348.4
nTPM
Schmiedel:
205.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
165.1
HPA sample
nTPM
gdT-cell nTPM: 119.6
Samples: 6
Max nTPM: 159.3
Min nTPM: 79.4
P10809_1007
110.1
P10809_1022
159.3
P10809_1041
79.4
P10809_1060
128.4
P10809_1077
109.3
P10809_1098
130.9
MAIT T-cell nTPM: 165.1
Samples: 6
Max nTPM: 234.5
Min nTPM: 101.4
P10809_1006
157.7
P10809_1024
234.5
P10809_1043
101.4
P10809_1062
180.7
P10809_1083
164.4
P10809_1097
151.9
Memory CD4 T-cell nTPM: 115.6
Samples: 6
Max nTPM: 141.3
Min nTPM: 72.6
P10809_1014
130.6
P10809_1026
141.3
P10809_1045
72.6
P10809_1064
110.3
P10809_1086
109.6
P10809_1113
129.0
Memory CD8 T-cell nTPM: 112.4
Samples: 5
Max nTPM: 144.7
Min nTPM: 67.2
P10809_1012
144.7
P10809_1027
135.3
P10809_1046
67.2
P10809_1065
96.6
P10809_1111
118.4
Naive CD4 T-cell nTPM: 111.6
Samples: 6
Max nTPM: 133.8
Min nTPM: 70.9
P10809_1015
110.1
P10809_1030
123.7
P10809_1049
70.9
P10809_1068
133.8
P10809_1085
121.5
P10809_1112
109.6
Naive CD8 T-cell nTPM: 114.0
Samples: 6
Max nTPM: 140.1
Min nTPM: 81.4
P10809_1016
121.7
P10809_1031
139.5
P10809_1050
81.4
P10809_1069
140.1
P10809_1087
101.2
P10809_1110
100.2
T-reg nTPM: 154.2
Samples: 6
Max nTPM: 198.6
Min nTPM: 99.2
P10809_1018
164.8
P10809_1037
193.2
P10809_1056
99.2
P10809_1075
122.5
P10809_1094
198.6
P10809_1106
146.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
348.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 279.8
Samples: 4
Max nTPM: 360.8
Min nTPM: 189.9
RHH5202_R3573
328.2
RHH5230_R3602
360.8
RHH5259_R3631
240.1
RHH5288_R3660
189.9
Effector memory CD8 T-cell nTPM: 324.1
Samples: 4
Max nTPM: 375.4
Min nTPM: 225.7
RHH5203_R3574
346.2
RHH5231_R3603
375.4
RHH5260_R3632
348.9
RHH5289_R3661
225.7
MAIT T-cell nTPM: 331.9
Samples: 4
Max nTPM: 411.9
Min nTPM: 177.4
RHH5233_R3605
379.6
RHH5205_R3576
411.9
RHH5262_R3634
358.6
RHH5297_R3663
177.4
Memory CD4 T-cell TFH nTPM: 253.1
Samples: 4
Max nTPM: 303.1
Min nTPM: 164.0
RHH5300_R3666
164.0
RHH5236_R3608
303.1
RHH5265_R3637
272.1
RHH5208_R3579
273.3
Memory CD4 T-cell Th1 nTPM: 247.4
Samples: 4
Max nTPM: 305.6
Min nTPM: 150.8
RHH5210_R3581
277.3
RHH5302_R3668
150.8
RHH5238_R3610
256.0
RHH5267_R3639
305.6
Memory CD4 T-cell Th1/Th17 nTPM: 273.0
Samples: 4
Max nTPM: 364.8
Min nTPM: 193.5
RHH5303_R3669
193.5
RHH5211_R3582
364.8
RHH5239_R3611
280.6
RHH5268_R3640
253.2
Memory CD4 T-cell Th17 nTPM: 305.3
Samples: 4
Max nTPM: 440.6
Min nTPM: 173.6
RHH5304_R3670
173.6
RHH5212_R3583
320.7
RHH5240_R3612
440.6
RHH5269_R3641
286.1
Memory CD4 T-cell Th2 nTPM: 268.8
Samples: 4
Max nTPM: 326.7
Min nTPM: 175.7
RHH5305_R3671
175.7
RHH5213_R3584
326.7
RHH5241_R3613
285.0
RHH5270_R3642
287.6
Naive CD4 T-cell nTPM: 246.8
Samples: 4
Max nTPM: 330.2
Min nTPM: 181.1
RHH5306_R3672
181.1
RHH5214_R3585
244.9
RHH5242_R3614
330.2
RHH5271_R3643
231.0
Naive CD8 T-cell nTPM: 267.7
Samples: 4
Max nTPM: 381.8
Min nTPM: 172.1
RHH5201_R3572
381.8
RHH5229_R3601
266.3
RHH5258_R3630
250.5
RHH5287_R3659
172.1
Non-Vd2 gdTCR nTPM: 348.4
Samples: 4
Max nTPM: 436.2
Min nTPM: 185.4
RHH5235_R3607
436.2
RHH5264_R3636
409.2
RHH5207_R3578
362.6
RHH5299_R3665
185.4
T-reg nTPM: 272.2
Samples: 4
Max nTPM: 377.1
Min nTPM: 123.6
RHH5301_R3667
123.6
RHH5237_R3609
377.1
RHH5266_R3638
281.6
RHH5209_R3580
306.3
Terminal effector memory CD4 T-cell nTPM: 323.1
Samples: 2
Max nTPM: 410.5
Min nTPM: 235.6
RHH5243_R3615
410.5
RHH5272_R3644
235.6
Terminal effector memory CD8 T-cell nTPM: 296.1
Samples: 4
Max nTPM: 396.5
Min nTPM: 173.0
RHH5232_R3604
396.5
RHH5204_R3575
306.0
RHH5261_R3633
308.7
RHH5296_R3662
173.0
Vd2 gdTCR nTPM: 345.9
Samples: 4
Max nTPM: 418.7
Min nTPM: 188.8
RHH5234_R3606
408.0
RHH5206_R3577
368.2
RHH5263_R3635
418.7
RHH5298_R3664
188.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.