BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:0.4 nTPM
HPA Brain:0.8 nTPM
GTEx:0.4 nTPM

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 0.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 0.5
1857 Female, age 85, left hemisphere 1.2
2290 Female, age 72, unknown 0.7
2289 Male, age 61, right hemisphere 0.6
1854 Male, age 80, left hemisphere 0.5
2846 Female, age 79, unknown 0.5
1781 Male, age 74, unknown 0.3
2288 Male, age 75, left hemisphere 0.3
2481 Female, age 94, left hemisphere 0.1
Globus pallidus, externus
nTPM: 0.1
2567 Female, age 72, unknown 0.4
2395 Male, age 75, both hemispheres 0.2
1996 Male, age 80, right hemisphere 0.1
2646 Male, age 61, right hemisphere 0.0
2772 Female, age 79, unknown 0.0
Globus pallidus, internus
nTPM: 0.2
2483 Female, age 94, right hemisphere 0.7
2287 Male, age 75, right hemisphere 0.3
2566 Female, age 72, unknown 0.3
2037 Male, age 80, right hemisphere 0.2
1818 Male, age 74, unknown 0.1
2778 Female, age 91, both hemispheres 0.1
2111 Female, age 85, right hemisphere 0.0
Nucleus accumbens
nTPM: 0.8
1806 Female, age 85, left hemisphere 1.5
1783 Male, age 74, unknown 1.1
2824 Male, age 61, right hemisphere 1.0
2391 Female, age 94, left hemisphere 0.9
1856 Female, age 91, right hemisphere 0.5
2698 Female, age 72, unknown 0.5
2732 Male, age 80, right hemisphere 0.3
2286 Male, age 75, left hemisphere 0.2
Nucleus basalis of Meynert
nTPM: 0.2
2393 Male, age 80, right hemisphere 0.3
2484 Female, age 94, left hemisphere 0.3
2821 Male, age 75, both hemispheres 0.3
2569 Male, age 61, both hemispheres 0.1
Nucleus of the diagonal band
nTPM: 0.3
2195 Female, age 85, both hemispheres 0.6
1979 Male, age 74, unknown 0.4
1812 Female, age 91, both hemispheres 0.2
2029 Male, age 61, right hemisphere 0.2
2775 Male, age 80, right hemisphere 0.1
Putamen
nTPM: 0.4
2466 Female, age 79, unknown 0.7
2482 Female, age 94, left hemisphere 0.7
1829 Male, age 74, unknown 0.5
2489 Female, age 72, unknown 0.5
1937 Female, age 91, right hemisphere 0.3
2647 Male, age 75, left hemisphere 0.3
1838 Male, age 80, right hemisphere 0.1
Septal nuclei
nTPM: 0.3
2059 Female, age 85, both hemispheres 0.5
2394 Male, age 61, left hemisphere 0.4
1960 Male, age 74, unknown 0.3
2009 Female, age 91, both hemispheres 0.3
2031 Female, age 72, unknown 0.2
2199 Male, age 80, right hemisphere 0.2
2629 Female, age 94, right hemisphere 0.0
Stria terminalis, bed nucleus
nTPM: 0.3
1974 Female, age 91, both hemispheres 0.3
2201 Male, age 74, unknown 0.2
2486 Female, age 94, both hemispheres 0.2

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 0.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 0.2
Samples: 246

Max nTPM: 1.7
Min nTPM: 0.0
Std nTPM: 0.2
Median nTPM: 0.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 1.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 1.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 0.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 0.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 0.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 0.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 0.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 0.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 0.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 0.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 0.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 0.4
Samples: 246

Max nTPM: 1.6
Min nTPM: 0.0
Std nTPM: 0.3
Median nTPM: 0.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 1.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 1.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 1.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 1.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 1.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 1.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 1.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 1.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 1.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 1.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 1.1
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Brain - Putamen (basal ganglia)
Average nTPM: 0.1
Samples: 205

Max nTPM: 0.8
Min nTPM: 0.0
Std nTPM: 0.1
Median nTPM: 0.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 0.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 0.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 0.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 0.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 0.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 0.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 0.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 0.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 0.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 0.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 0.5
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