HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:4.8 nTPM
HPA Brain:32.3 nTPM
GTEx:4.8 nTPM
FANTOM5:26.5 Scaled Tags Per Million
Pig:49.0 nTPM
Mouse:50.4 nTPM
Allen mouse:16.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031090Antibody HPA031091
Glial cells MediumNot detected
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.3
Sample id Sample description nTPM
Hippocampus
nTPM: 27.1
2148 Female, age 91, left hemisphere 33.2
2621 Female, age 67, right hemisphere 31.1
1898 Male, age 80, left hemisphere 28.5
1855 Male, age 76, left hemisphere 25.1
2529 Female, age 94, left hemisphere 22.6
1911 Female, age 85, right hemisphere 22.0
Dentate gyrus
nTPM: 29.5
2531 Female, age 67, both hemispheres 40.1
2528 Male, age 74, both hemispheres 33.1
1927 Female, age 91, both hemispheres 30.8
2246 Female, age 85, both hemispheres 28.1
2010 Male, age 76, both hemispheres 23.3
2530 Female, age 94, left hemisphere 21.4
Entorhinal gyrus
nTPM: 31.7
2764 Male, age 80, right hemisphere 37.2
2686 Male, age 75, right hemisphere 32.4
1938 Female, age 85, left hemisphere 31.7
2613 Female, age 94, left hemisphere 31.4
1787 Male, age 76, left hemisphere 31.0
2117 Female, age 91, right hemisphere 26.5
Hippocampus, CA1
nTPM: 29.9
2749 Male, age 80, left hemisphere 33.9
2082 Female, age 91, right hemisphere 32.7
2045 Male, age 76, both hemispheres 30.1
1873 Female, age 85, both hemispheres 27.0
2527 Male, age 74, both hemispheres 25.7
Hippocampus, CA2
nTPM: 27.0
1892 Male, age 76, both hemispheres 30.5
1940 Female, age 85, left hemisphere 29.9
2113 Female, age 91, right hemisphere 27.8
2249 Male, age 74, both hemispheres 25.6
1963 Male, age 80, left hemisphere 24.4
2437 Female, age 94, left hemisphere 23.7
Hippocampus, CA3
nTPM: 31.4
2620 Female, age 94, left hemisphere 39.8
2861 Female, age 67, both hemispheres 34.2
2137 Male, age 80, left hemisphere 30.6
2436 Male, age 74, both hemispheres 30.2
1867 Male, age 76, both hemispheres 28.0
1891 Female, age 85, both hemispheres 25.5
Parahippocampal cortex
nTPM: 31.0
2693 Female, age 94, both hemispheres 33.5
2622 Female, age 67, right hemisphere 33.1
2250 Female, age 67, right hemisphere 32.4
1850 Male, age 80, both hemispheres 32.3
2018 Male, age 76, both hemispheres 32.0
1933 Female, age 85, both hemispheres 30.4
2245 Female, age 91, both hemispheres 30.3
2532 Female, age 72, left hemisphere 29.0
2692 Male, age 74, both hemispheres 29.0
1990 Female, age 91, right hemisphere 28.6
Perirhinal gyrus
nTPM: 32.3
1847 Female, age 91, left hemisphere 36.4
1841 Female, age 85, right hemisphere 35.7
1794 Male, age 80, right hemisphere 31.4
2848 Male, age 76, right hemisphere 31.3
2521 Female, age 94, right hemisphere 26.5
Subiculum
nTPM: 27.5
2619 Male, age 74, both hemispheres 32.5
2729 Female, age 91, right hemisphere 32.2
1977 Female, age 85, both hemispheres 29.7
1901 Male, age 80, both hemispheres 24.6
2042 Male, age 76, both hemispheres 23.7
2438 Female, age 94, left hemisphere 22.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 4.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 4.8
Samples: 197

Max nTPM: 11.7
Min nTPM: 0.6
Std nTPM: 1.8
Median nTPM: 4.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 11.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 11.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 10.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 8.7
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 8.6
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 8.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 8.4
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 8.3
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 8.1
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 7.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 7.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.5
FF:10169-103B7 60 years, female 30.1
FF:10153-102I9 76 years, female 22.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 49.0
Pig sample Sample description nTPM
Subiculum
nTPM: 29.8
Samples: 4

Max nTPM: 37.7
Min nTPM: 25.9
Sample A Female 37.7
Sample B Female 26.4
Sample C Male 29.3
Sample D Male 25.9
Dorsal hippocampus
nTPM: 49.0
Samples: 4

Max nTPM: 60.9
Min nTPM: 38.4
Sample A Female 60.9
Sample B Female 52.8
Sample C Male 38.4
Sample D Male 43.8
Entorhinal cortex
nTPM: 27.6
Samples: 4

Max nTPM: 30.3
Min nTPM: 26.1
Sample A Female 30.3
Sample B Female 26.4
Sample C Male 26.1
Sample D Male 27.6
Ventral hippocampus
nTPM: 44.3
Samples: 4

Max nTPM: 67.3
Min nTPM: 28.8
Sample A Female 37.5
Sample B Female 28.8
Sample C Male 43.5
Sample D Male 67.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 50.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.4
Samples: 4

Max nTPM: 46.3
Min nTPM: 40.5
Sample A Male 46.3
Sample B Male 42.5
Sample C Female 40.5
Sample D Female 44.1
Hippocampal formation
nTPM: 50.4
Samples: 4

Max nTPM: 51.7
Min nTPM: 47.4
Sample A Male 51.3
Sample B Male 47.4
Sample C Female 51.7
Sample D Female 51.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.3
69446316 Antisense, RP_050419_01_D05, Mouse strain C57BL/6J (56 days, male) 19.8
69174529 Antisense, RP_050329_03_A03, Mouse strain C57BL/6J (56 days, male) 12.8

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