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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
68.5
nTPM
Monaco:
77.2
nTPM
Schmiedel:
30.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
68.5
HPA sample
nTPM
gdT-cell nTPM: 38.7
Samples: 6
Max nTPM: 50.9
Min nTPM: 26.8
P10809_1007
36.2
P10809_1022
47.9
P10809_1041
50.9
P10809_1060
26.8
P10809_1077
33.1
P10809_1098
37.4
MAIT T-cell nTPM: 43.3
Samples: 6
Max nTPM: 49.8
Min nTPM: 39.7
P10809_1006
42.6
P10809_1024
39.7
P10809_1043
47.2
P10809_1062
40.4
P10809_1083
40.1
P10809_1097
49.8
Memory CD4 T-cell nTPM: 41.7
Samples: 6
Max nTPM: 45.7
Min nTPM: 31.4
P10809_1014
43.8
P10809_1026
45.7
P10809_1045
44.8
P10809_1064
41.5
P10809_1086
31.4
P10809_1113
42.9
Memory CD8 T-cell nTPM: 33.9
Samples: 5
Max nTPM: 47.8
Min nTPM: 23.1
P10809_1012
43.5
P10809_1027
27.9
P10809_1046
47.8
P10809_1065
27.3
P10809_1111
23.1
Naive CD4 T-cell nTPM: 36.8
Samples: 6
Max nTPM: 43.3
Min nTPM: 31.2
P10809_1015
31.2
P10809_1030
38.6
P10809_1049
39.0
P10809_1068
34.0
P10809_1085
34.4
P10809_1112
43.3
Naive CD8 T-cell nTPM: 40.2
Samples: 6
Max nTPM: 53.4
Min nTPM: 31.5
P10809_1016
41.0
P10809_1031
32.6
P10809_1050
36.3
P10809_1069
53.4
P10809_1087
31.5
P10809_1110
46.3
T-reg nTPM: 68.6
Samples: 6
Max nTPM: 100.3
Min nTPM: 47.5
P10809_1018
64.8
P10809_1037
47.5
P10809_1056
100.3
P10809_1075
60.7
P10809_1094
84.3
P10809_1106
53.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
77.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 56.1
Samples: 4
Max nTPM: 64.2
Min nTPM: 36.7
RHH5202_R3573
59.8
RHH5230_R3602
63.7
RHH5259_R3631
36.7
RHH5288_R3660
64.2
Effector memory CD8 T-cell nTPM: 64.8
Samples: 4
Max nTPM: 84.6
Min nTPM: 35.1
RHH5203_R3574
73.1
RHH5231_R3603
84.6
RHH5260_R3632
35.1
RHH5289_R3661
66.4
MAIT T-cell nTPM: 60.2
Samples: 4
Max nTPM: 74.5
Min nTPM: 41.8
RHH5233_R3605
74.5
RHH5205_R3576
41.8
RHH5262_R3634
56.0
RHH5297_R3663
68.6
Memory CD4 T-cell TFH nTPM: 67.3
Samples: 4
Max nTPM: 85.5
Min nTPM: 55.7
RHH5300_R3666
59.6
RHH5236_R3608
68.5
RHH5265_R3637
55.7
RHH5208_R3579
85.5
Memory CD4 T-cell Th1 nTPM: 43.5
Samples: 4
Max nTPM: 58.6
Min nTPM: 29.9
RHH5210_R3581
50.3
RHH5302_R3668
58.6
RHH5238_R3610
35.2
RHH5267_R3639
29.9
Memory CD4 T-cell Th1/Th17 nTPM: 54.8
Samples: 4
Max nTPM: 81.7
Min nTPM: 26.4
RHH5303_R3669
81.7
RHH5211_R3582
79.4
RHH5239_R3611
26.4
RHH5268_R3640
31.8
Memory CD4 T-cell Th17 nTPM: 50.0
Samples: 4
Max nTPM: 88.7
Min nTPM: 31.6
RHH5304_R3670
41.6
RHH5212_R3583
88.7
RHH5240_R3612
38.2
RHH5269_R3641
31.6
Memory CD4 T-cell Th2 nTPM: 67.9
Samples: 4
Max nTPM: 91.3
Min nTPM: 49.7
RHH5305_R3671
69.1
RHH5213_R3584
61.6
RHH5241_R3613
91.3
RHH5270_R3642
49.7
Naive CD4 T-cell nTPM: 56.3
Samples: 4
Max nTPM: 70.4
Min nTPM: 34.4
RHH5306_R3672
68.8
RHH5214_R3585
70.4
RHH5242_R3614
51.4
RHH5271_R3643
34.4
Naive CD8 T-cell nTPM: 46.3
Samples: 4
Max nTPM: 65.6
Min nTPM: 29.1
RHH5201_R3572
65.6
RHH5229_R3601
29.1
RHH5258_R3630
51.9
RHH5287_R3659
38.7
Non-Vd2 gdTCR nTPM: 62.7
Samples: 4
Max nTPM: 76.7
Min nTPM: 38.7
RHH5235_R3607
38.7
RHH5264_R3636
66.1
RHH5207_R3578
76.7
RHH5299_R3665
69.4
T-reg nTPM: 52.3
Samples: 4
Max nTPM: 68.0
Min nTPM: 37.3
RHH5301_R3667
68.0
RHH5237_R3609
60.5
RHH5266_R3638
37.3
RHH5209_R3580
43.3
Terminal effector memory CD4 T-cell nTPM: 46.5
Samples: 2
Max nTPM: 74.7
Min nTPM: 18.3
RHH5243_R3615
18.3
RHH5272_R3644
74.7
Terminal effector memory CD8 T-cell nTPM: 77.2
Samples: 4
Max nTPM: 98.6
Min nTPM: 42.6
RHH5232_R3604
92.4
RHH5204_R3575
98.6
RHH5261_R3633
42.6
RHH5296_R3662
75.2
Vd2 gdTCR nTPM: 68.5
Samples: 4
Max nTPM: 76.5
Min nTPM: 58.3
RHH5234_R3606
65.6
RHH5206_R3577
73.5
RHH5263_R3635
58.3
RHH5298_R3664
76.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
