HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:21.2 nTPM
HPA Brain:83.0 nTPM
GTEx:21.2 nTPM
FANTOM5:98.7 Scaled Tags Per Million
Pig:55.5 nTPM
Mouse:65.7 nTPM
Allen mouse:18.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026861
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 83.0
Sample id Sample description nTPM
Hippocampus
nTPM: 72.7
1855 Male, age 76, left hemisphere 80.4
1898 Male, age 80, left hemisphere 77.4
2148 Female, age 91, left hemisphere 75.6
2621 Female, age 67, right hemisphere 75.2
1911 Female, age 85, right hemisphere 67.9
2529 Female, age 94, left hemisphere 59.6
Dentate gyrus
nTPM: 74.6
2531 Female, age 67, both hemispheres 91.6
1927 Female, age 91, both hemispheres 81.2
2010 Male, age 76, both hemispheres 75.9
2246 Female, age 85, both hemispheres 73.9
2528 Male, age 74, both hemispheres 73.0
2530 Female, age 94, left hemisphere 52.4
Entorhinal gyrus
nTPM: 69.7
1938 Female, age 85, left hemisphere 82.4
2764 Male, age 80, right hemisphere 70.4
2613 Female, age 94, left hemisphere 68.6
2686 Male, age 75, right hemisphere 67.6
2117 Female, age 91, right hemisphere 65.9
1787 Male, age 76, left hemisphere 63.1
Hippocampus, CA1
nTPM: 76.0
1873 Female, age 85, both hemispheres 81.9
2082 Female, age 91, right hemisphere 75.6
2527 Male, age 74, both hemispheres 75.3
2045 Male, age 76, both hemispheres 74.6
2749 Male, age 80, left hemisphere 72.5
Hippocampus, CA2
nTPM: 67.9
2249 Male, age 74, both hemispheres 73.0
2113 Female, age 91, right hemisphere 71.9
1892 Male, age 76, both hemispheres 70.0
1940 Female, age 85, left hemisphere 69.0
1963 Male, age 80, left hemisphere 67.6
2437 Female, age 94, left hemisphere 55.7
Hippocampus, CA3
nTPM: 75.0
2620 Female, age 94, left hemisphere 87.3
2861 Female, age 67, both hemispheres 81.5
2436 Male, age 74, both hemispheres 75.7
2137 Male, age 80, left hemisphere 73.3
1891 Female, age 85, both hemispheres 68.2
1867 Male, age 76, both hemispheres 63.7
Parahippocampal cortex
nTPM: 78.5
2622 Female, age 67, right hemisphere 95.7
2693 Female, age 94, both hemispheres 91.6
1850 Male, age 80, both hemispheres 87.2
2532 Female, age 72, left hemisphere 83.6
1933 Female, age 85, both hemispheres 79.6
2018 Male, age 76, both hemispheres 77.7
2245 Female, age 91, both hemispheres 70.5
2250 Female, age 67, right hemisphere 68.3
1990 Female, age 91, right hemisphere 65.9
2692 Male, age 74, both hemispheres 64.6
Perirhinal gyrus
nTPM: 83.0
1841 Female, age 85, right hemisphere 99.2
1794 Male, age 80, right hemisphere 88.2
1847 Female, age 91, left hemisphere 81.8
2521 Female, age 94, right hemisphere 77.8
2848 Male, age 76, right hemisphere 67.8
Subiculum
nTPM: 66.1
2729 Female, age 91, right hemisphere 72.9
1977 Female, age 85, both hemispheres 71.2
2438 Female, age 94, left hemisphere 66.5
2042 Male, age 76, both hemispheres 62.5
2619 Male, age 74, both hemispheres 62.4
1901 Male, age 80, both hemispheres 60.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.2
Samples: 197

Max nTPM: 39.1
Min nTPM: 10.2
Std nTPM: 5.4
Median nTPM: 20.4
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 39.1
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 38.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 37.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 37.2
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 36.2
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 35.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 35.5
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 32.5
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 31.9
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 31.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 30.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 98.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 98.7
FF:10169-103B7 60 years, female 100.7
FF:10153-102I9 76 years, female 96.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 55.5
Pig sample Sample description nTPM
Subiculum
nTPM: 50.1
Samples: 4

Max nTPM: 60.2
Min nTPM: 44.9
Sample A Female 60.2
Sample B Female 45.9
Sample C Male 44.9
Sample D Male 49.4
Dorsal hippocampus
nTPM: 55.5
Samples: 4

Max nTPM: 63.4
Min nTPM: 46.2
Sample A Female 63.4
Sample B Female 53.8
Sample C Male 58.7
Sample D Male 46.2
Entorhinal cortex
nTPM: 50.1
Samples: 4

Max nTPM: 56.8
Min nTPM: 45.3
Sample A Female 50.5
Sample B Female 56.8
Sample C Male 47.8
Sample D Male 45.3
Ventral hippocampus
nTPM: 48.1
Samples: 4

Max nTPM: 59.3
Min nTPM: 35.8
Sample A Female 59.3
Sample B Female 47.7
Sample C Male 35.8
Sample D Male 49.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 65.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 54.1
Samples: 4

Max nTPM: 58.0
Min nTPM: 49.8
Sample A Male 52.1
Sample B Male 49.8
Sample C Female 56.4
Sample D Female 58.0
Hippocampal formation
nTPM: 65.7
Samples: 4

Max nTPM: 71.4
Min nTPM: 56.7
Sample A Male 56.7
Sample B Male 69.8
Sample C Female 71.4
Sample D Female 64.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 18.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.8
69059940 Antisense, RP_050317_04_E12, Mouse strain C57BL/6J (56 days, male) 18.8

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