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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1114.2
nTPM
Monaco:
513.5
nTPM
Schmiedel:
289.0
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1114.2
HPA sample
nTPM
gdT-cell nTPM: 163.3
Samples: 6
Max nTPM: 196.5
Min nTPM: 103.5
P10809_1007
170.5
P10809_1022
183.1
P10809_1041
196.5
P10809_1060
169.6
P10809_1077
103.5
P10809_1098
156.4
MAIT T-cell nTPM: 241.5
Samples: 6
Max nTPM: 343.9
Min nTPM: 162.5
P10809_1006
343.9
P10809_1024
259.1
P10809_1043
280.2
P10809_1062
213.4
P10809_1083
189.9
P10809_1097
162.5
Memory CD4 T-cell nTPM: 623.3
Samples: 6
Max nTPM: 944.8
Min nTPM: 379.0
P10809_1014
614.4
P10809_1026
944.8
P10809_1045
628.3
P10809_1064
573.6
P10809_1086
379.0
P10809_1113
599.4
Memory CD8 T-cell nTPM: 481.8
Samples: 5
Max nTPM: 745.7
Min nTPM: 296.3
P10809_1012
440.6
P10809_1027
452.9
P10809_1046
296.3
P10809_1065
745.7
P10809_1111
473.5
Naive CD4 T-cell nTPM: 691.4
Samples: 6
Max nTPM: 925.5
Min nTPM: 471.2
P10809_1015
598.9
P10809_1030
925.5
P10809_1049
741.4
P10809_1068
748.1
P10809_1085
471.2
P10809_1112
663.1
Naive CD8 T-cell nTPM: 871.4
Samples: 6
Max nTPM: 1918.7
Min nTPM: 84.9
P10809_1016
566.6
P10809_1031
842.1
P10809_1050
1290.3
P10809_1069
1918.7
P10809_1087
84.9
P10809_1110
525.7
T-reg nTPM: 1114.2
Samples: 6
Max nTPM: 1619.4
Min nTPM: 817.3
P10809_1018
817.3
P10809_1037
1196.8
P10809_1056
1619.4
P10809_1075
939.5
P10809_1094
1012.2
P10809_1106
1099.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
513.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 286.4
Samples: 4
Max nTPM: 408.3
Min nTPM: 163.8
RHH5202_R3573
408.3
RHH5230_R3602
163.8
RHH5259_R3631
236.8
RHH5288_R3660
336.6
Effector memory CD8 T-cell nTPM: 204.3
Samples: 4
Max nTPM: 216.8
Min nTPM: 193.3
RHH5203_R3574
193.3
RHH5231_R3603
206.6
RHH5260_R3632
216.8
RHH5289_R3661
200.6
MAIT T-cell nTPM: 149.4
Samples: 4
Max nTPM: 287.2
Min nTPM: 62.7
RHH5233_R3605
141.4
RHH5205_R3576
62.7
RHH5262_R3634
106.2
RHH5297_R3663
287.2
Memory CD4 T-cell TFH nTPM: 513.5
Samples: 4
Max nTPM: 631.2
Min nTPM: 341.4
RHH5300_R3666
564.4
RHH5236_R3608
631.2
RHH5265_R3637
517.0
RHH5208_R3579
341.4
Memory CD4 T-cell Th1 nTPM: 317.0
Samples: 4
Max nTPM: 405.8
Min nTPM: 243.7
RHH5210_R3581
405.8
RHH5302_R3668
330.6
RHH5238_R3610
287.7
RHH5267_R3639
243.7
Memory CD4 T-cell Th1/Th17 nTPM: 305.8
Samples: 4
Max nTPM: 447.4
Min nTPM: 212.1
RHH5303_R3669
447.4
RHH5211_R3582
340.7
RHH5239_R3611
212.1
RHH5268_R3640
222.8
Memory CD4 T-cell Th17 nTPM: 279.1
Samples: 4
Max nTPM: 313.9
Min nTPM: 244.6
RHH5304_R3670
294.3
RHH5212_R3583
263.6
RHH5240_R3612
313.9
RHH5269_R3641
244.6
Memory CD4 T-cell Th2 nTPM: 282.6
Samples: 4
Max nTPM: 387.2
Min nTPM: 226.0
RHH5305_R3671
277.1
RHH5213_R3584
226.0
RHH5241_R3613
387.2
RHH5270_R3642
240.2
Naive CD4 T-cell nTPM: 370.7
Samples: 4
Max nTPM: 510.0
Min nTPM: 248.1
RHH5306_R3672
510.0
RHH5214_R3585
248.1
RHH5242_R3614
330.4
RHH5271_R3643
394.2
Naive CD8 T-cell nTPM: 315.4
Samples: 4
Max nTPM: 468.7
Min nTPM: 199.3
RHH5201_R3572
345.1
RHH5229_R3601
199.3
RHH5258_R3630
468.7
RHH5287_R3659
248.4
Non-Vd2 gdTCR nTPM: 372.4
Samples: 4
Max nTPM: 724.8
Min nTPM: 36.5
RHH5235_R3607
36.5
RHH5264_R3636
724.8
RHH5207_R3578
324.6
RHH5299_R3665
403.8
T-reg nTPM: 482.5
Samples: 4
Max nTPM: 592.6
Min nTPM: 357.1
RHH5301_R3667
592.6
RHH5237_R3609
535.3
RHH5266_R3638
444.9
RHH5209_R3580
357.1
Terminal effector memory CD4 T-cell nTPM: 157.0
Samples: 2
Max nTPM: 223.2
Min nTPM: 90.7
RHH5243_R3615
223.2
RHH5272_R3644
90.7
Terminal effector memory CD8 T-cell nTPM: 350.7
Samples: 4
Max nTPM: 537.2
Min nTPM: 239.7
RHH5232_R3604
239.7
RHH5204_R3575
338.2
RHH5261_R3633
287.7
RHH5296_R3662
537.2
Vd2 gdTCR nTPM: 366.4
Samples: 4
Max nTPM: 519.9
Min nTPM: 186.4
RHH5234_R3606
330.1
RHH5206_R3577
186.4
RHH5263_R3635
429.1
RHH5298_R3664
519.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.