HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:14.8 nTPM
HPA Brain:16.0 nTPM
GTEx:14.8 nTPM
FANTOM5:15.6 Scaled Tags Per Million
Pig:8.8 nTPM
Mouse:21.0 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044787Antibody HPA054660
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.0
Sample id Sample description nTPM
Hippocampus
nTPM: 14.3
1898 Male, age 80, left hemisphere 15.6
2529 Female, age 94, left hemisphere 15.0
2148 Female, age 91, left hemisphere 14.0
2621 Female, age 67, right hemisphere 14.0
1911 Female, age 85, right hemisphere 13.8
1855 Male, age 76, left hemisphere 13.4
Dentate gyrus
nTPM: 14.6
2010 Male, age 76, both hemispheres 16.1
1927 Female, age 91, both hemispheres 15.4
2530 Female, age 94, left hemisphere 15.0
2531 Female, age 67, both hemispheres 14.2
2528 Male, age 74, both hemispheres 14.0
2246 Female, age 85, both hemispheres 13.0
Entorhinal gyrus
nTPM: 13.9
2764 Male, age 80, right hemisphere 15.6
2686 Male, age 75, right hemisphere 14.3
1938 Female, age 85, left hemisphere 13.7
2117 Female, age 91, right hemisphere 13.5
1787 Male, age 76, left hemisphere 13.4
2613 Female, age 94, left hemisphere 12.9
Hippocampus, CA1
nTPM: 16.0
2749 Male, age 80, left hemisphere 21.2
1873 Female, age 85, both hemispheres 16.3
2045 Male, age 76, both hemispheres 15.4
2527 Male, age 74, both hemispheres 14.5
2082 Female, age 91, right hemisphere 12.9
Hippocampus, CA2
nTPM: 15.2
1963 Male, age 80, left hemisphere 20.1
1892 Male, age 76, both hemispheres 16.8
2437 Female, age 94, left hemisphere 14.7
2113 Female, age 91, right hemisphere 13.7
1940 Female, age 85, left hemisphere 13.3
2249 Male, age 74, both hemispheres 12.6
Hippocampus, CA3
nTPM: 15.3
1867 Male, age 76, both hemispheres 18.5
2137 Male, age 80, left hemisphere 18.2
2861 Female, age 67, both hemispheres 15.1
1891 Female, age 85, both hemispheres 14.7
2436 Male, age 74, both hemispheres 13.3
2620 Female, age 94, left hemisphere 12.2
Parahippocampal cortex
nTPM: 12.8
2018 Male, age 76, both hemispheres 16.6
1850 Male, age 80, both hemispheres 13.4
2245 Female, age 91, both hemispheres 13.3
1933 Female, age 85, both hemispheres 13.2
1990 Female, age 91, right hemisphere 12.9
2692 Male, age 74, both hemispheres 12.9
2532 Female, age 72, left hemisphere 12.4
2250 Female, age 67, right hemisphere 11.5
2622 Female, age 67, right hemisphere 11.3
2693 Female, age 94, both hemispheres 10.6
Perirhinal gyrus
nTPM: 12.4
1847 Female, age 91, left hemisphere 14.8
1794 Male, age 80, right hemisphere 13.4
1841 Female, age 85, right hemisphere 12.6
2521 Female, age 94, right hemisphere 11.2
2848 Male, age 76, right hemisphere 10.3
Subiculum
nTPM: 13.7
2042 Male, age 76, both hemispheres 16.0
1901 Male, age 80, both hemispheres 15.5
2729 Female, age 91, right hemisphere 14.2
1977 Female, age 85, both hemispheres 13.1
2619 Male, age 74, both hemispheres 12.2
2438 Female, age 94, left hemisphere 11.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.8
Samples: 197

Max nTPM: 26.5
Min nTPM: 9.8
Std nTPM: 2.5
Median nTPM: 14.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 26.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 20.7
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 19.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 19.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 19.7
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 19.6
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 19.4
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 19.3
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 19.3
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 18.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 18.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.6
FF:10169-103B7 60 years, female 16.6
FF:10153-102I9 76 years, female 14.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.8
Pig sample Sample description nTPM
Subiculum
nTPM: 6.8
Samples: 4

Max nTPM: 9.2
Min nTPM: 5.7
Sample A Female 9.2
Sample B Female 5.7
Sample C Male 6.2
Sample D Male 6.2
Dorsal hippocampus
nTPM: 8.8
Samples: 4

Max nTPM: 11.4
Min nTPM: 7.0
Sample A Female 11.4
Sample B Female 9.7
Sample C Male 7.2
Sample D Male 7.0
Entorhinal cortex
nTPM: 6.4
Samples: 4

Max nTPM: 7.6
Min nTPM: 5.3
Sample A Female 6.2
Sample B Female 6.5
Sample C Male 7.6
Sample D Male 5.3
Ventral hippocampus
nTPM: 8.1
Samples: 4

Max nTPM: 9.9
Min nTPM: 6.3
Sample A Female 8.3
Sample B Female 6.3
Sample C Male 9.9
Sample D Male 7.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.3
Samples: 4

Max nTPM: 19.3
Min nTPM: 17.4
Sample A Male 19.3
Sample B Male 18.5
Sample C Female 17.4
Sample D Female 18.0
Hippocampal formation
nTPM: 21.0
Samples: 4

Max nTPM: 21.8
Min nTPM: 20.4
Sample A Male 21.1
Sample B Male 21.8
Sample C Female 20.4
Sample D Female 20.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
68666571 Antisense, RP_050126_02_E07, Mouse strain C57BL/6J (56 days, male) 1.4

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