HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:26.0 nTPM
HPA Brain:30.6 nTPM
GTEx:26.0 nTPM
FANTOM5:54.8 Scaled Tags Per Million
Pig:8.7 nTPM
Mouse:50.5 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA065232
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.6
Sample id Sample description nTPM
Hippocampus
nTPM: 27.4
1898 Male, age 80, left hemisphere 32.7
1855 Male, age 76, left hemisphere 32.4
1911 Female, age 85, right hemisphere 26.3
2148 Female, age 91, left hemisphere 25.5
2529 Female, age 94, left hemisphere 24.1
2621 Female, age 67, right hemisphere 23.7
Dentate gyrus
nTPM: 26.5
2010 Male, age 76, both hemispheres 32.3
2246 Female, age 85, both hemispheres 27.4
1927 Female, age 91, both hemispheres 26.5
2530 Female, age 94, left hemisphere 26.1
2531 Female, age 67, both hemispheres 23.8
2528 Male, age 74, both hemispheres 23.0
Entorhinal gyrus
nTPM: 25.1
2117 Female, age 91, right hemisphere 29.0
1938 Female, age 85, left hemisphere 27.5
1787 Male, age 76, left hemisphere 27.4
2764 Male, age 80, right hemisphere 24.6
2686 Male, age 75, right hemisphere 22.3
2613 Female, age 94, left hemisphere 20.0
Hippocampus, CA1
nTPM: 30.6
2045 Male, age 76, both hemispheres 44.8
2749 Male, age 80, left hemisphere 33.1
1873 Female, age 85, both hemispheres 28.7
2527 Male, age 74, both hemispheres 23.9
2082 Female, age 91, right hemisphere 22.5
Hippocampus, CA2
nTPM: 26.9
1892 Male, age 76, both hemispheres 34.7
1963 Male, age 80, left hemisphere 28.9
1940 Female, age 85, left hemisphere 25.8
2437 Female, age 94, left hemisphere 24.7
2249 Male, age 74, both hemispheres 24.1
2113 Female, age 91, right hemisphere 22.9
Hippocampus, CA3
nTPM: 26.3
1867 Male, age 76, both hemispheres 36.5
1891 Female, age 85, both hemispheres 29.2
2137 Male, age 80, left hemisphere 26.9
2861 Female, age 67, both hemispheres 22.9
2436 Male, age 74, both hemispheres 21.9
2620 Female, age 94, left hemisphere 20.7
Parahippocampal cortex
nTPM: 24.2
1933 Female, age 85, both hemispheres 28.9
1850 Male, age 80, both hemispheres 28.5
1990 Female, age 91, right hemisphere 27.0
2018 Male, age 76, both hemispheres 26.3
2245 Female, age 91, both hemispheres 23.9
2532 Female, age 72, left hemisphere 23.4
2693 Female, age 94, both hemispheres 22.1
2250 Female, age 67, right hemisphere 22.0
2692 Male, age 74, both hemispheres 21.8
2622 Female, age 67, right hemisphere 18.3
Perirhinal gyrus
nTPM: 26.0
1847 Female, age 91, left hemisphere 27.5
1841 Female, age 85, right hemisphere 26.1
2848 Male, age 76, right hemisphere 25.9
1794 Male, age 80, right hemisphere 25.4
2521 Female, age 94, right hemisphere 25.0
Subiculum
nTPM: 26.4
1901 Male, age 80, both hemispheres 30.9
1977 Female, age 85, both hemispheres 29.2
2042 Male, age 76, both hemispheres 26.4
2729 Female, age 91, right hemisphere 25.5
2619 Male, age 74, both hemispheres 23.3
2438 Female, age 94, left hemisphere 23.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.0
Samples: 197

Max nTPM: 44.0
Min nTPM: 16.5
Std nTPM: 4.5
Median nTPM: 25.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 44.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 43.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 42.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 37.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 36.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 35.6
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 35.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 35.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 33.8
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 33.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 33.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 54.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 54.8
FF:10153-102I9 76 years, female 56.7
FF:10169-103B7 60 years, female 52.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.7
Pig sample Sample description nTPM
Subiculum
nTPM: 7.6
Samples: 4

Max nTPM: 8.2
Min nTPM: 6.1
Sample A Female 6.1
Sample B Female 8.2
Sample C Male 8.1
Sample D Male 8.1
Dorsal hippocampus
nTPM: 7.5
Samples: 4

Max nTPM: 8.9
Min nTPM: 6.2
Sample A Female 6.2
Sample B Female 7.8
Sample C Male 7.1
Sample D Male 8.9
Entorhinal cortex
nTPM: 8.7
Samples: 4

Max nTPM: 9.6
Min nTPM: 8.1
Sample A Female 8.6
Sample B Female 8.6
Sample C Male 8.1
Sample D Male 9.6
Ventral hippocampus
nTPM: 7.5
Samples: 4

Max nTPM: 8.9
Min nTPM: 6.2
Sample A Female 7.1
Sample B Female 8.9
Sample C Male 6.2
Sample D Male 7.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 50.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 49.4
Samples: 4

Max nTPM: 51.6
Min nTPM: 46.7
Sample A Male 49.5
Sample B Male 51.6
Sample C Female 49.9
Sample D Female 46.7
Hippocampal formation
nTPM: 50.5
Samples: 4

Max nTPM: 54.3
Min nTPM: 45.6
Sample A Male 50.5
Sample B Male 51.4
Sample C Female 54.3
Sample D Female 45.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
67765730 Antisense, RP_040916_01_G03, Mouse strain C57BL/6J (56 days, male) 0.4

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