HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:59.7 nTPM
HPA Brain:30.9 nTPM
GTEx:59.7 nTPM
FANTOM5:109.7 Scaled Tags Per Million
Pig:23.1 nTPM
Mouse:31.3 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043737
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.9
Sample id Sample description nTPM
Hippocampus
nTPM: 23.5
1911 Female, age 85, right hemisphere 26.8
2529 Female, age 94, left hemisphere 25.6
1898 Male, age 80, left hemisphere 23.4
1855 Male, age 76, left hemisphere 22.6
2621 Female, age 67, right hemisphere 22.1
2148 Female, age 91, left hemisphere 20.7
Dentate gyrus
nTPM: 24.5
2530 Female, age 94, left hemisphere 35.2
2010 Male, age 76, both hemispheres 31.1
2528 Male, age 74, both hemispheres 24.3
2246 Female, age 85, both hemispheres 20.3
2531 Female, age 67, both hemispheres 19.0
1927 Female, age 91, both hemispheres 17.1
Entorhinal gyrus
nTPM: 23.9
2117 Female, age 91, right hemisphere 33.2
2764 Male, age 80, right hemisphere 25.8
2686 Male, age 75, right hemisphere 23.0
1938 Female, age 85, left hemisphere 22.3
1787 Male, age 76, left hemisphere 20.0
2613 Female, age 94, left hemisphere 19.0
Hippocampus, CA1
nTPM: 21.1
1873 Female, age 85, both hemispheres 23.8
2527 Male, age 74, both hemispheres 22.7
2082 Female, age 91, right hemisphere 21.1
2749 Male, age 80, left hemisphere 19.5
2045 Male, age 76, both hemispheres 18.2
Hippocampus, CA2
nTPM: 25.2
1963 Male, age 80, left hemisphere 31.9
2249 Male, age 74, both hemispheres 26.6
2437 Female, age 94, left hemisphere 26.5
1940 Female, age 85, left hemisphere 23.5
2113 Female, age 91, right hemisphere 22.8
1892 Male, age 76, both hemispheres 19.9
Hippocampus, CA3
nTPM: 20.9
1891 Female, age 85, both hemispheres 32.3
1867 Male, age 76, both hemispheres 24.6
2436 Male, age 74, both hemispheres 19.0
2861 Female, age 67, both hemispheres 17.9
2620 Female, age 94, left hemisphere 17.1
2137 Male, age 80, left hemisphere 14.7
Parahippocampal cortex
nTPM: 21.5
2018 Male, age 76, both hemispheres 27.2
2532 Female, age 72, left hemisphere 25.7
2692 Male, age 74, both hemispheres 25.6
1990 Female, age 91, right hemisphere 24.0
1850 Male, age 80, both hemispheres 21.9
1933 Female, age 85, both hemispheres 21.5
2245 Female, age 91, both hemispheres 20.4
2693 Female, age 94, both hemispheres 19.2
2622 Female, age 67, right hemisphere 15.2
2250 Female, age 67, right hemisphere 14.2
Perirhinal gyrus
nTPM: 17.0
2521 Female, age 94, right hemisphere 19.0
1841 Female, age 85, right hemisphere 17.0
1794 Male, age 80, right hemisphere 16.6
1847 Female, age 91, left hemisphere 16.4
2848 Male, age 76, right hemisphere 15.8
Subiculum
nTPM: 30.9
2042 Male, age 76, both hemispheres 47.1
1901 Male, age 80, both hemispheres 35.2
1977 Female, age 85, both hemispheres 29.4
2438 Female, age 94, left hemisphere 25.4
2619 Male, age 74, both hemispheres 24.8
2729 Female, age 91, right hemisphere 23.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 59.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 59.7
Samples: 197

Max nTPM: 208.2
Min nTPM: 18.8
Std nTPM: 32.5
Median nTPM: 50.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 208.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 203.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 156.0
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 140.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 138.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 137.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 135.1
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 134.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 129.5
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 128.1
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 126.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 109.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 109.7
FF:10153-102I9 76 years, female 155.0
FF:10169-103B7 60 years, female 64.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.1
Pig sample Sample description nTPM
Subiculum
nTPM: 18.9
Samples: 4

Max nTPM: 20.5
Min nTPM: 17.7
Sample A Female 20.5
Sample B Female 17.7
Sample C Male 17.9
Sample D Male 19.6
Dorsal hippocampus
nTPM: 23.2
Samples: 4

Max nTPM: 27.1
Min nTPM: 16.9
Sample A Female 26.6
Sample B Female 22.0
Sample C Male 27.1
Sample D Male 16.9
Entorhinal cortex
nTPM: 18.8
Samples: 4

Max nTPM: 20.1
Min nTPM: 16.1
Sample A Female 19.0
Sample B Female 19.9
Sample C Male 20.1
Sample D Male 16.1
Ventral hippocampus
nTPM: 22.1
Samples: 4

Max nTPM: 26.1
Min nTPM: 16.9
Sample A Female 20.6
Sample B Female 16.9
Sample C Male 26.1
Sample D Male 24.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.3
Samples: 4

Max nTPM: 30.4
Min nTPM: 23.2
Sample A Male 30.4
Sample B Male 26.1
Sample C Female 29.3
Sample D Female 23.2
Hippocampal formation
nTPM: 31.3
Samples: 4

Max nTPM: 40.5
Min nTPM: 26.8
Sample A Male 27.5
Sample B Male 26.8
Sample C Female 40.5
Sample D Female 30.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
69549165 Antisense, RP_050113_02_H12, Mouse strain C57BL/6J (56 days, male) 0.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org