HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:59.3 nTPM
HPA Brain:243.8 nTPM
GTEx:59.3 nTPM
FANTOM5:125.7 Scaled Tags Per Million
Pig:106.2 nTPM
Mouse:97.3 nTPM
Allen mouse:18.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004838Antibody HPA064678
Glial cells MediumNot detected
Neuronal cells HighLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 243.8
Sample id Sample description nTPM
Hippocampus
nTPM: 134.5
1898 Male, age 80, left hemisphere 157.1
2621 Female, age 67, right hemisphere 151.3
1911 Female, age 85, right hemisphere 148.2
1855 Male, age 76, left hemisphere 129.9
2529 Female, age 94, left hemisphere 110.8
2148 Female, age 91, left hemisphere 109.6
Dentate gyrus
nTPM: 138.2
2531 Female, age 67, both hemispheres 169.3
2530 Female, age 94, left hemisphere 156.2
2246 Female, age 85, both hemispheres 142.0
2010 Male, age 76, both hemispheres 134.1
1927 Female, age 91, both hemispheres 128.0
2528 Male, age 74, both hemispheres 99.4
Entorhinal gyrus
nTPM: 236.7
2613 Female, age 94, left hemisphere 294.7
1938 Female, age 85, left hemisphere 288.5
2764 Male, age 80, right hemisphere 274.9
1787 Male, age 76, left hemisphere 220.2
2686 Male, age 75, right hemisphere 189.4
2117 Female, age 91, right hemisphere 152.8
Hippocampus, CA1
nTPM: 147.2
2749 Male, age 80, left hemisphere 234.1
1873 Female, age 85, both hemispheres 155.2
2045 Male, age 76, both hemispheres 149.2
2527 Male, age 74, both hemispheres 102.9
2082 Female, age 91, right hemisphere 94.3
Hippocampus, CA2
nTPM: 140.7
1963 Male, age 80, left hemisphere 162.4
1892 Male, age 76, both hemispheres 160.6
2437 Female, age 94, left hemisphere 158.1
1940 Female, age 85, left hemisphere 157.6
2249 Male, age 74, both hemispheres 108.6
2113 Female, age 91, right hemisphere 96.9
Hippocampus, CA3
nTPM: 162.3
2620 Female, age 94, left hemisphere 211.2
2137 Male, age 80, left hemisphere 210.0
1867 Male, age 76, both hemispheres 161.2
1891 Female, age 85, both hemispheres 153.4
2861 Female, age 67, both hemispheres 144.4
2436 Male, age 74, both hemispheres 93.8
Parahippocampal cortex
nTPM: 194.1
1850 Male, age 80, both hemispheres 260.9
2532 Female, age 72, left hemisphere 254.8
1933 Female, age 85, both hemispheres 236.7
2693 Female, age 94, both hemispheres 216.3
2622 Female, age 67, right hemisphere 185.1
1990 Female, age 91, right hemisphere 180.4
2018 Male, age 76, both hemispheres 170.5
2692 Male, age 74, both hemispheres 153.5
2245 Female, age 91, both hemispheres 153.1
2250 Female, age 67, right hemisphere 129.4
Perirhinal gyrus
nTPM: 243.8
1841 Female, age 85, right hemisphere 292.9
1794 Male, age 80, right hemisphere 279.0
2848 Male, age 76, right hemisphere 254.1
1847 Female, age 91, left hemisphere 200.6
2521 Female, age 94, right hemisphere 192.4
Subiculum
nTPM: 162.0
1977 Female, age 85, both hemispheres 234.5
1901 Male, age 80, both hemispheres 189.3
2042 Male, age 76, both hemispheres 174.0
2438 Female, age 94, left hemisphere 151.4
2619 Male, age 74, both hemispheres 122.9
2729 Female, age 91, right hemisphere 99.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 59.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 59.3
Samples: 197

Max nTPM: 118.8
Min nTPM: 14.2
Std nTPM: 17.4
Median nTPM: 57.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 118.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 110.5
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 108.9
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 107.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 105.6
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 101.3
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 99.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 97.3
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 97.1
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 95.6
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 95.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 125.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 125.7
FF:10153-102I9 76 years, female 141.4
FF:10169-103B7 60 years, female 110.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 106.2
Pig sample Sample description nTPM
Subiculum
nTPM: 81.3
Samples: 4

Max nTPM: 111.9
Min nTPM: 66.0
Sample A Female 111.9
Sample B Female 73.5
Sample C Male 73.6
Sample D Male 66.0
Dorsal hippocampus
nTPM: 82.0
Samples: 4

Max nTPM: 96.5
Min nTPM: 66.0
Sample A Female 96.5
Sample B Female 79.3
Sample C Male 86.3
Sample D Male 66.0
Entorhinal cortex
nTPM: 106.2
Samples: 4

Max nTPM: 117.0
Min nTPM: 98.8
Sample A Female 117.0
Sample B Female 98.8
Sample C Male 100.8
Sample D Male 108.3
Ventral hippocampus
nTPM: 77.3
Samples: 4

Max nTPM: 114.3
Min nTPM: 52.2
Sample A Female 62.4
Sample B Female 52.2
Sample C Male 80.2
Sample D Male 114.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 97.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 97.3
Samples: 4

Max nTPM: 121.6
Min nTPM: 83.3
Sample A Male 91.9
Sample B Male 92.3
Sample C Female 83.3
Sample D Female 121.6
Hippocampal formation
nTPM: 82.2
Samples: 4

Max nTPM: 92.1
Min nTPM: 73.0
Sample A Male 78.5
Sample B Male 92.1
Sample C Female 85.1
Sample D Female 73.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 18.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.3
69672808 Antisense, RP_050428_04_E06, Mouse strain C57BL/6J (56 days, male) 19.1
73992909 Antisense, RP_051214_01_F03, Mouse strain C57BL/6J (56 days, male) 17.5

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