HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:66.6 nTPM
HPA Brain:19.4 nTPM
GTEx:66.6 nTPM
FANTOM5:91.0 Scaled Tags Per Million
Pig:30.1 nTPM
Mouse:35.3 nTPM
Allen mouse:4.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA069321
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.4
Sample id Sample description nTPM
Hippocampus
nTPM: 17.9
2529 Female, age 94, left hemisphere 21.0
2621 Female, age 67, right hemisphere 20.7
2148 Female, age 91, left hemisphere 18.0
1911 Female, age 85, right hemisphere 16.8
1855 Male, age 76, left hemisphere 15.7
1898 Male, age 80, left hemisphere 15.1
Dentate gyrus
nTPM: 19.0
2531 Female, age 67, both hemispheres 24.9
2530 Female, age 94, left hemisphere 20.1
2246 Female, age 85, both hemispheres 19.9
2010 Male, age 76, both hemispheres 18.3
1927 Female, age 91, both hemispheres 16.5
2528 Male, age 74, both hemispheres 14.5
Entorhinal gyrus
nTPM: 15.4
2764 Male, age 80, right hemisphere 18.1
2686 Male, age 75, right hemisphere 16.9
1787 Male, age 76, left hemisphere 16.0
2117 Female, age 91, right hemisphere 14.4
2613 Female, age 94, left hemisphere 13.7
1938 Female, age 85, left hemisphere 13.3
Hippocampus, CA1
nTPM: 17.4
2749 Male, age 80, left hemisphere 19.0
2082 Female, age 91, right hemisphere 18.7
2045 Male, age 76, both hemispheres 17.0
1873 Female, age 85, both hemispheres 16.5
2527 Male, age 74, both hemispheres 15.5
Hippocampus, CA2
nTPM: 15.5
1892 Male, age 76, both hemispheres 19.4
1940 Female, age 85, left hemisphere 15.9
2437 Female, age 94, left hemisphere 15.9
2249 Male, age 74, both hemispheres 15.0
2113 Female, age 91, right hemisphere 13.5
1963 Male, age 80, left hemisphere 13.3
Hippocampus, CA3
nTPM: 19.4
2861 Female, age 67, both hemispheres 28.8
2137 Male, age 80, left hemisphere 19.1
2620 Female, age 94, left hemisphere 18.4
1867 Male, age 76, both hemispheres 17.8
1891 Female, age 85, both hemispheres 16.4
2436 Male, age 74, both hemispheres 15.7
Parahippocampal cortex
nTPM: 18.0
2622 Female, age 67, right hemisphere 29.2
2692 Male, age 74, both hemispheres 20.7
1850 Male, age 80, both hemispheres 18.7
2245 Female, age 91, both hemispheres 18.0
2532 Female, age 72, left hemisphere 17.9
2250 Female, age 67, right hemisphere 17.3
2018 Male, age 76, both hemispheres 15.9
1933 Female, age 85, both hemispheres 15.2
2693 Female, age 94, both hemispheres 14.5
1990 Female, age 91, right hemisphere 12.9
Perirhinal gyrus
nTPM: 16.0
2848 Male, age 76, right hemisphere 18.4
1794 Male, age 80, right hemisphere 18.2
1841 Female, age 85, right hemisphere 17.4
1847 Female, age 91, left hemisphere 13.6
2521 Female, age 94, right hemisphere 12.6
Subiculum
nTPM: 18.1
2042 Male, age 76, both hemispheres 22.7
1901 Male, age 80, both hemispheres 20.1
2619 Male, age 74, both hemispheres 17.9
1977 Female, age 85, both hemispheres 17.3
2438 Female, age 94, left hemisphere 16.8
2729 Female, age 91, right hemisphere 14.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 66.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 66.6
Samples: 197

Max nTPM: 161.6
Min nTPM: 23.0
Std nTPM: 23.8
Median nTPM: 61.5
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 161.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 143.8
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 139.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 133.9
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 132.7
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 132.0
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 127.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 123.1
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 114.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 114.0
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 106.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 91.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 91.0
FF:10169-103B7 60 years, female 96.5
FF:10153-102I9 76 years, female 85.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.1
Pig sample Sample description nTPM
Subiculum
nTPM: 26.0
Samples: 4

Max nTPM: 27.3
Min nTPM: 24.4
Sample A Female 27.3
Sample B Female 24.4
Sample C Male 26.8
Sample D Male 25.6
Dorsal hippocampus
nTPM: 28.7
Samples: 4

Max nTPM: 33.2
Min nTPM: 25.2
Sample A Female 27.0
Sample B Female 29.4
Sample C Male 25.2
Sample D Male 33.2
Entorhinal cortex
nTPM: 29.6
Samples: 4

Max nTPM: 32.2
Min nTPM: 26.7
Sample A Female 26.7
Sample B Female 30.9
Sample C Male 28.6
Sample D Male 32.2
Ventral hippocampus
nTPM: 30.1
Samples: 4

Max nTPM: 34.0
Min nTPM: 26.3
Sample A Female 27.0
Sample B Female 26.3
Sample C Male 33.1
Sample D Male 34.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 35.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.4
Samples: 4

Max nTPM: 37.1
Min nTPM: 29.8
Sample A Male 29.8
Sample B Male 33.0
Sample C Female 33.6
Sample D Female 37.1
Hippocampal formation
nTPM: 35.3
Samples: 4

Max nTPM: 38.9
Min nTPM: 31.5
Sample A Male 36.0
Sample B Male 38.9
Sample C Female 34.6
Sample D Female 31.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.1
68080678 Antisense, RP_040929_01_D08, Mouse strain C57BL/6J (56 days, male) 4.1

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