HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:22.4 nTPM
HPA Brain:69.2 nTPM
GTEx:22.4 nTPM
FANTOM5:40.7 Scaled Tags Per Million
Pig:99.2 nTPM
Mouse:37.5 nTPM
Allen mouse:4.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA060938
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 69.2
Sample id Sample description nTPM
Hippocampus
nTPM: 56.4
2621 Female, age 67, right hemisphere 71.2
2148 Female, age 91, left hemisphere 63.9
1898 Male, age 80, left hemisphere 53.7
2529 Female, age 94, left hemisphere 53.5
1911 Female, age 85, right hemisphere 48.5
1855 Male, age 76, left hemisphere 47.6
Dentate gyrus
nTPM: 53.7
2531 Female, age 67, both hemispheres 73.6
1927 Female, age 91, both hemispheres 60.0
2528 Male, age 74, both hemispheres 50.0
2246 Female, age 85, both hemispheres 48.7
2010 Male, age 76, both hemispheres 45.1
2530 Female, age 94, left hemisphere 44.7
Entorhinal gyrus
nTPM: 53.4
2613 Female, age 94, left hemisphere 72.2
2764 Male, age 80, right hemisphere 61.7
2686 Male, age 75, right hemisphere 53.1
1787 Male, age 76, left hemisphere 48.6
1938 Female, age 85, left hemisphere 44.2
2117 Female, age 91, right hemisphere 40.5
Hippocampus, CA1
nTPM: 56.8
2749 Male, age 80, left hemisphere 73.0
2045 Male, age 76, both hemispheres 60.9
2527 Male, age 74, both hemispheres 55.4
2082 Female, age 91, right hemisphere 48.1
1873 Female, age 85, both hemispheres 46.4
Hippocampus, CA2
nTPM: 51.0
1963 Male, age 80, left hemisphere 54.5
2437 Female, age 94, left hemisphere 52.9
2113 Female, age 91, right hemisphere 51.9
1940 Female, age 85, left hemisphere 51.2
2249 Male, age 74, both hemispheres 48.5
1892 Male, age 76, both hemispheres 47.3
Hippocampus, CA3
nTPM: 69.2
2620 Female, age 94, left hemisphere 94.0
2861 Female, age 67, both hemispheres 84.5
2137 Male, age 80, left hemisphere 81.3
2436 Male, age 74, both hemispheres 66.6
1867 Male, age 76, both hemispheres 46.0
1891 Female, age 85, both hemispheres 42.6
Parahippocampal cortex
nTPM: 60.2
2622 Female, age 67, right hemisphere 75.2
2693 Female, age 94, both hemispheres 74.5
2245 Female, age 91, both hemispheres 71.8
2532 Female, age 72, left hemisphere 71.2
1850 Male, age 80, both hemispheres 61.3
2018 Male, age 76, both hemispheres 54.0
2250 Female, age 67, right hemisphere 51.6
1933 Female, age 85, both hemispheres 49.7
1990 Female, age 91, right hemisphere 48.9
2692 Male, age 74, both hemispheres 44.0
Perirhinal gyrus
nTPM: 66.6
2521 Female, age 94, right hemisphere 78.9
1794 Male, age 80, right hemisphere 77.7
1841 Female, age 85, right hemisphere 65.3
1847 Female, age 91, left hemisphere 58.9
2848 Male, age 76, right hemisphere 52.5
Subiculum
nTPM: 48.0
2438 Female, age 94, left hemisphere 58.3
1901 Male, age 80, both hemispheres 52.4
2729 Female, age 91, right hemisphere 49.0
2619 Male, age 74, both hemispheres 46.4
2042 Male, age 76, both hemispheres 42.1
1977 Female, age 85, both hemispheres 39.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.4
Samples: 197

Max nTPM: 64.6
Min nTPM: 5.0
Std nTPM: 10.0
Median nTPM: 21.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 64.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 56.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 53.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 48.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 47.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 46.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 44.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 42.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 42.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 42.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 41.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.7
FF:10169-103B7 60 years, female 41.5
FF:10153-102I9 76 years, female 39.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 99.2
Pig sample Sample description nTPM
Subiculum
nTPM: 58.8
Samples: 4

Max nTPM: 74.5
Min nTPM: 44.6
Sample A Female 74.5
Sample B Female 44.6
Sample C Male 53.7
Sample D Male 62.4
Dorsal hippocampus
nTPM: 40.1
Samples: 4

Max nTPM: 42.7
Min nTPM: 38.1
Sample A Female 39.0
Sample B Female 42.7
Sample C Male 38.1
Sample D Male 40.7
Entorhinal cortex
nTPM: 99.2
Samples: 4

Max nTPM: 115.7
Min nTPM: 90.7
Sample A Female 115.7
Sample B Female 90.7
Sample C Male 91.3
Sample D Male 99.1
Ventral hippocampus
nTPM: 39.2
Samples: 4

Max nTPM: 46.5
Min nTPM: 32.8
Sample A Female 33.3
Sample B Female 32.8
Sample C Male 46.5
Sample D Male 44.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 37.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 37.6
Samples: 4

Max nTPM: 42.6
Min nTPM: 32.1
Sample A Male 34.8
Sample B Male 42.6
Sample C Female 32.1
Sample D Female 40.7
Hippocampal formation
nTPM: 21.7
Samples: 4

Max nTPM: 22.5
Min nTPM: 20.8
Sample A Male 22.5
Sample B Male 21.7
Sample C Female 20.8
Sample D Female 21.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.7
68193036 Antisense, RP_040825_01_G07, Mouse strain C57BL/6J (56 days, male) 4.7

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