HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:35.9 nTPM
HPA Brain:36.6 nTPM
GTEx:35.9 nTPM
FANTOM5:48.3 Scaled Tags Per Million
Pig:35.2 nTPM
Mouse:56.9 nTPM
Allen mouse:6.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019204
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.6
Sample id Sample description nTPM
Hippocampus
nTPM: 32.1
1898 Male, age 80, left hemisphere 43.7
2529 Female, age 94, left hemisphere 32.4
1911 Female, age 85, right hemisphere 32.1
1855 Male, age 76, left hemisphere 29.5
2621 Female, age 67, right hemisphere 28.2
2148 Female, age 91, left hemisphere 26.7
Dentate gyrus
nTPM: 32.7
2010 Male, age 76, both hemispheres 41.8
2530 Female, age 94, left hemisphere 36.4
2528 Male, age 74, both hemispheres 33.2
1927 Female, age 91, both hemispheres 32.1
2246 Female, age 85, both hemispheres 30.1
2531 Female, age 67, both hemispheres 22.8
Entorhinal gyrus
nTPM: 29.4
2764 Male, age 80, right hemisphere 33.3
1787 Male, age 76, left hemisphere 32.0
1938 Female, age 85, left hemisphere 30.0
2117 Female, age 91, right hemisphere 29.5
2686 Male, age 75, right hemisphere 29.2
2613 Female, age 94, left hemisphere 22.6
Hippocampus, CA1
nTPM: 36.6
2749 Male, age 80, left hemisphere 54.7
1873 Female, age 85, both hemispheres 37.1
2527 Male, age 74, both hemispheres 33.0
2045 Male, age 76, both hemispheres 30.1
2082 Female, age 91, right hemisphere 28.0
Hippocampus, CA2
nTPM: 34.6
1892 Male, age 76, both hemispheres 43.5
1963 Male, age 80, left hemisphere 40.7
2249 Male, age 74, both hemispheres 36.1
2437 Female, age 94, left hemisphere 31.3
2113 Female, age 91, right hemisphere 28.3
1940 Female, age 85, left hemisphere 27.6
Hippocampus, CA3
nTPM: 34.7
2137 Male, age 80, left hemisphere 47.7
1867 Male, age 76, both hemispheres 42.9
1891 Female, age 85, both hemispheres 33.4
2436 Male, age 74, both hemispheres 31.7
2620 Female, age 94, left hemisphere 27.7
2861 Female, age 67, both hemispheres 25.0
Parahippocampal cortex
nTPM: 29.9
2018 Male, age 76, both hemispheres 35.5
2250 Female, age 67, right hemisphere 34.5
1850 Male, age 80, both hemispheres 32.6
1990 Female, age 91, right hemisphere 31.7
1933 Female, age 85, both hemispheres 30.5
2692 Male, age 74, both hemispheres 29.8
2245 Female, age 91, both hemispheres 28.9
2693 Female, age 94, both hemispheres 27.2
2532 Female, age 72, left hemisphere 25.1
2622 Female, age 67, right hemisphere 23.7
Perirhinal gyrus
nTPM: 34.4
2521 Female, age 94, right hemisphere 37.7
1847 Female, age 91, left hemisphere 37.0
1841 Female, age 85, right hemisphere 35.3
1794 Male, age 80, right hemisphere 33.9
2848 Male, age 76, right hemisphere 28.3
Subiculum
nTPM: 32.2
1901 Male, age 80, both hemispheres 35.7
2042 Male, age 76, both hemispheres 35.6
1977 Female, age 85, both hemispheres 35.5
2619 Male, age 74, both hemispheres 28.9
2438 Female, age 94, left hemisphere 28.7
2729 Female, age 91, right hemisphere 28.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.9
Samples: 197

Max nTPM: 72.8
Min nTPM: 25.9
Std nTPM: 6.2
Median nTPM: 34.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 72.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 58.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 57.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 56.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 51.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 49.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 48.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 47.7
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 47.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 46.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 46.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 48.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 48.3
FF:10169-103B7 60 years, female 59.1
FF:10153-102I9 76 years, female 37.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.2
Pig sample Sample description nTPM
Subiculum
nTPM: 23.8
Samples: 4

Max nTPM: 26.7
Min nTPM: 21.2
Sample A Female 26.7
Sample B Female 24.7
Sample C Male 21.2
Sample D Male 22.7
Dorsal hippocampus
nTPM: 31.8
Samples: 4

Max nTPM: 36.9
Min nTPM: 23.2
Sample A Female 36.9
Sample B Female 34.4
Sample C Male 23.2
Sample D Male 32.5
Entorhinal cortex
nTPM: 35.3
Samples: 4

Max nTPM: 40.3
Min nTPM: 32.2
Sample A Female 34.9
Sample B Female 40.3
Sample C Male 33.6
Sample D Male 32.2
Ventral hippocampus
nTPM: 29.7
Samples: 4

Max nTPM: 31.6
Min nTPM: 26.8
Sample A Female 31.6
Sample B Female 29.6
Sample C Male 26.8
Sample D Male 30.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 56.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 51.6
Samples: 4

Max nTPM: 54.7
Min nTPM: 48.5
Sample A Male 48.5
Sample B Male 54.2
Sample C Female 54.7
Sample D Female 48.8
Hippocampal formation
nTPM: 57.0
Samples: 4

Max nTPM: 62.2
Min nTPM: 52.8
Sample A Male 62.2
Sample B Male 52.8
Sample C Female 55.5
Sample D Female 57.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.0
67978662 Antisense, RP_040923_01_E04, Mouse strain C57BL/6J (56 days, male) 6.0

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