HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:17.4 nTPM
HPA Brain:42.9 nTPM
GTEx:17.4 nTPM
FANTOM5:45.3 Scaled Tags Per Million
Pig:17.1 nTPM
Mouse:9.7 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022923
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.9
Sample id Sample description nTPM
Hippocampus
nTPM: 42.9
2621 Female, age 67, right hemisphere 53.4
2529 Female, age 94, left hemisphere 52.8
2148 Female, age 91, left hemisphere 40.0
1855 Male, age 76, left hemisphere 39.9
1911 Female, age 85, right hemisphere 38.6
1898 Male, age 80, left hemisphere 32.9
Dentate gyrus
nTPM: 35.9
2531 Female, age 67, both hemispheres 49.3
2530 Female, age 94, left hemisphere 37.2
1927 Female, age 91, both hemispheres 34.9
2246 Female, age 85, both hemispheres 33.2
2528 Male, age 74, both hemispheres 31.1
2010 Male, age 76, both hemispheres 29.6
Entorhinal gyrus
nTPM: 39.7
2613 Female, age 94, left hemisphere 47.8
2686 Male, age 75, right hemisphere 42.8
1787 Male, age 76, left hemisphere 41.2
1938 Female, age 85, left hemisphere 36.5
2117 Female, age 91, right hemisphere 35.3
2764 Male, age 80, right hemisphere 34.3
Hippocampus, CA1
nTPM: 34.2
2527 Male, age 74, both hemispheres 42.5
2082 Female, age 91, right hemisphere 35.3
2749 Male, age 80, left hemisphere 33.5
1873 Female, age 85, both hemispheres 32.7
2045 Male, age 76, both hemispheres 27.0
Hippocampus, CA2
nTPM: 35.0
1963 Male, age 80, left hemisphere 45.5
2113 Female, age 91, right hemisphere 37.8
2437 Female, age 94, left hemisphere 34.4
1940 Female, age 85, left hemisphere 32.8
1892 Male, age 76, both hemispheres 31.2
2249 Male, age 74, both hemispheres 28.5
Hippocampus, CA3
nTPM: 38.1
2861 Female, age 67, both hemispheres 60.5
2620 Female, age 94, left hemisphere 43.1
2137 Male, age 80, left hemisphere 36.7
1867 Male, age 76, both hemispheres 30.1
1891 Female, age 85, both hemispheres 29.5
2436 Male, age 74, both hemispheres 28.8
Parahippocampal cortex
nTPM: 37.1
2622 Female, age 67, right hemisphere 50.0
2245 Female, age 91, both hemispheres 45.4
2250 Female, age 67, right hemisphere 40.6
2692 Male, age 74, both hemispheres 37.9
2532 Female, age 72, left hemisphere 36.6
1933 Female, age 85, both hemispheres 35.1
2018 Male, age 76, both hemispheres 32.9
1850 Male, age 80, both hemispheres 31.3
2693 Female, age 94, both hemispheres 30.5
1990 Female, age 91, right hemisphere 30.1
Perirhinal gyrus
nTPM: 36.9
2521 Female, age 94, right hemisphere 44.1
1847 Female, age 91, left hemisphere 36.3
1794 Male, age 80, right hemisphere 36.2
2848 Male, age 76, right hemisphere 34.7
1841 Female, age 85, right hemisphere 33.3
Subiculum
nTPM: 31.3
2619 Male, age 74, both hemispheres 37.9
2042 Male, age 76, both hemispheres 32.1
2729 Female, age 91, right hemisphere 31.8
1977 Female, age 85, both hemispheres 30.9
1901 Male, age 80, both hemispheres 28.2
2438 Female, age 94, left hemisphere 26.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.4
Samples: 197

Max nTPM: 59.4
Min nTPM: 5.6
Std nTPM: 8.9
Median nTPM: 15.3
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 59.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 56.7
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 52.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 51.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 39.8
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 39.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 38.9
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 37.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 37.1
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 35.5
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 33.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 45.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 45.3
FF:10153-102I9 76 years, female 49.2
FF:10169-103B7 60 years, female 41.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.1
Pig sample Sample description nTPM
Subiculum
nTPM: 16.2
Samples: 4

Max nTPM: 18.0
Min nTPM: 14.5
Sample A Female 18.0
Sample B Female 14.5
Sample C Male 17.5
Sample D Male 14.7
Dorsal hippocampus
nTPM: 14.6
Samples: 4

Max nTPM: 16.1
Min nTPM: 13.3
Sample A Female 16.1
Sample B Female 15.2
Sample C Male 13.9
Sample D Male 13.3
Entorhinal cortex
nTPM: 17.1
Samples: 4

Max nTPM: 19.5
Min nTPM: 14.1
Sample A Female 18.6
Sample B Female 14.1
Sample C Male 19.5
Sample D Male 16.2
Ventral hippocampus
nTPM: 15.5
Samples: 4

Max nTPM: 19.5
Min nTPM: 13.2
Sample A Female 13.7
Sample B Female 13.2
Sample C Male 19.5
Sample D Male 15.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.7
Samples: 4

Max nTPM: 11.4
Min nTPM: 8.6
Sample A Male 8.9
Sample B Male 9.8
Sample C Female 8.6
Sample D Female 11.4
Hippocampal formation
nTPM: 7.9
Samples: 4

Max nTPM: 9.0
Min nTPM: 6.8
Sample A Male 6.9
Sample B Male 8.8
Sample C Female 6.8
Sample D Female 9.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
68798909 Antisense, RP_050217_01_E11, Mouse strain C57BL/6J (56 days, male) 0.6

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