HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:48.0 nTPM
HPA Brain:42.3 nTPM
GTEx:48.0 nTPM
FANTOM5:59.5 Scaled Tags Per Million
Pig:43.1 nTPM
Mouse:70.0 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026785
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.3
Sample id Sample description nTPM
Hippocampus
nTPM: 39.7
1898 Male, age 80, left hemisphere 45.0
2148 Female, age 91, left hemisphere 41.8
2529 Female, age 94, left hemisphere 41.3
1855 Male, age 76, left hemisphere 39.9
2621 Female, age 67, right hemisphere 37.8
1911 Female, age 85, right hemisphere 32.5
Dentate gyrus
nTPM: 42.2
2530 Female, age 94, left hemisphere 52.5
2010 Male, age 76, both hemispheres 42.5
2246 Female, age 85, both hemispheres 42.4
2528 Male, age 74, both hemispheres 42.4
2531 Female, age 67, both hemispheres 37.7
1927 Female, age 91, both hemispheres 35.4
Entorhinal gyrus
nTPM: 42.3
2686 Male, age 75, right hemisphere 45.3
2764 Male, age 80, right hemisphere 43.8
2117 Female, age 91, right hemisphere 43.3
2613 Female, age 94, left hemisphere 41.9
1787 Male, age 76, left hemisphere 41.5
1938 Female, age 85, left hemisphere 37.9
Hippocampus, CA1
nTPM: 36.4
1873 Female, age 85, both hemispheres 43.9
2527 Male, age 74, both hemispheres 36.2
2749 Male, age 80, left hemisphere 35.0
2082 Female, age 91, right hemisphere 34.5
2045 Male, age 76, both hemispheres 32.2
Hippocampus, CA2
nTPM: 40.5
1963 Male, age 80, left hemisphere 46.8
2437 Female, age 94, left hemisphere 44.8
1892 Male, age 76, both hemispheres 41.9
1940 Female, age 85, left hemisphere 38.9
2113 Female, age 91, right hemisphere 36.3
2249 Male, age 74, both hemispheres 34.4
Hippocampus, CA3
nTPM: 40.7
2436 Male, age 74, both hemispheres 56.4
2861 Female, age 67, both hemispheres 47.2
1891 Female, age 85, both hemispheres 38.0
1867 Male, age 76, both hemispheres 36.7
2620 Female, age 94, left hemisphere 34.6
2137 Male, age 80, left hemisphere 31.5
Parahippocampal cortex
nTPM: 37.1
2692 Male, age 74, both hemispheres 40.3
2622 Female, age 67, right hemisphere 40.0
1933 Female, age 85, both hemispheres 39.4
2532 Female, age 72, left hemisphere 37.9
1850 Male, age 80, both hemispheres 36.3
1990 Female, age 91, right hemisphere 36.3
2245 Female, age 91, both hemispheres 36.2
2250 Female, age 67, right hemisphere 36.1
2018 Male, age 76, both hemispheres 35.5
2693 Female, age 94, both hemispheres 33.3
Perirhinal gyrus
nTPM: 36.5
1847 Female, age 91, left hemisphere 39.4
1794 Male, age 80, right hemisphere 37.9
2521 Female, age 94, right hemisphere 36.2
2848 Male, age 76, right hemisphere 34.7
1841 Female, age 85, right hemisphere 34.2
Subiculum
nTPM: 38.9
1977 Female, age 85, both hemispheres 44.2
2619 Male, age 74, both hemispheres 40.9
2729 Female, age 91, right hemisphere 39.8
2438 Female, age 94, left hemisphere 37.1
1901 Male, age 80, both hemispheres 36.9
2042 Male, age 76, both hemispheres 34.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 48.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.0
Samples: 197

Max nTPM: 83.3
Min nTPM: 17.8
Std nTPM: 11.2
Median nTPM: 46.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 83.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 82.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 82.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 81.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 78.7
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 76.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 72.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 69.1
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 68.9
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 66.2
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 66.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 59.5
FF:10153-102I9 76 years, female 67.2
FF:10169-103B7 60 years, female 51.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.1
Pig sample Sample description nTPM
Subiculum
nTPM: 42.9
Samples: 4

Max nTPM: 53.4
Min nTPM: 38.7
Sample A Female 53.4
Sample B Female 38.7
Sample C Male 39.8
Sample D Male 39.8
Dorsal hippocampus
nTPM: 40.6
Samples: 4

Max nTPM: 49.2
Min nTPM: 32.8
Sample A Female 49.2
Sample B Female 37.9
Sample C Male 42.4
Sample D Male 32.8
Entorhinal cortex
nTPM: 43.1
Samples: 4

Max nTPM: 51.2
Min nTPM: 37.2
Sample A Female 39.8
Sample B Female 44.0
Sample C Male 51.2
Sample D Male 37.2
Ventral hippocampus
nTPM: 42.8
Samples: 4

Max nTPM: 57.2
Min nTPM: 32.1
Sample A Female 42.3
Sample B Female 32.1
Sample C Male 57.2
Sample D Male 39.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 70.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 63.3
Samples: 4

Max nTPM: 74.7
Min nTPM: 56.9
Sample A Male 63.4
Sample B Male 56.9
Sample C Female 58.2
Sample D Female 74.7
Hippocampal formation
nTPM: 70.1
Samples: 4

Max nTPM: 78.1
Min nTPM: 60.6
Sample A Male 60.6
Sample B Male 65.0
Sample C Female 76.5
Sample D Female 78.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
69407409 Antisense, RP_050414_01_F03, Mouse strain C57BL/6J (56 days, male) 1.3
74988740 Antisense, RP_060315_04_B08, Mouse strain C57BL/6J (56 days, male) 0.5

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