HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:33.0 nTPM
HPA Brain:58.1 nTPM
GTEx:33.0 nTPM
FANTOM5:32.4 Scaled Tags Per Million
Pig:37.9 nTPM
Mouse:274.7 nTPM
Allen mouse:24.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008716
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 58.1
Sample id Sample description nTPM
Hippocampus
nTPM: 45.9
1898 Male, age 80, left hemisphere 59.8
2529 Female, age 94, left hemisphere 48.0
2621 Female, age 67, right hemisphere 44.7
2148 Female, age 91, left hemisphere 43.3
1911 Female, age 85, right hemisphere 40.2
1855 Male, age 76, left hemisphere 39.0
Dentate gyrus
nTPM: 44.7
1927 Female, age 91, both hemispheres 53.2
2010 Male, age 76, both hemispheres 46.4
2530 Female, age 94, left hemisphere 45.6
2528 Male, age 74, both hemispheres 42.9
2246 Female, age 85, both hemispheres 41.2
2531 Female, age 67, both hemispheres 38.9
Entorhinal gyrus
nTPM: 50.0
2764 Male, age 80, right hemisphere 58.8
2686 Male, age 75, right hemisphere 51.1
1938 Female, age 85, left hemisphere 50.9
1787 Male, age 76, left hemisphere 49.8
2117 Female, age 91, right hemisphere 45.0
2613 Female, age 94, left hemisphere 44.5
Hippocampus, CA1
nTPM: 48.5
2749 Male, age 80, left hemisphere 64.3
1873 Female, age 85, both hemispheres 51.9
2527 Male, age 74, both hemispheres 45.6
2045 Male, age 76, both hemispheres 40.3
2082 Female, age 91, right hemisphere 40.2
Hippocampus, CA2
nTPM: 49.4
1892 Male, age 76, both hemispheres 63.4
1963 Male, age 80, left hemisphere 57.4
2249 Male, age 74, both hemispheres 48.0
1940 Female, age 85, left hemisphere 44.0
2437 Female, age 94, left hemisphere 43.0
2113 Female, age 91, right hemisphere 40.4
Hippocampus, CA3
nTPM: 47.8
1867 Male, age 76, both hemispheres 58.7
2137 Male, age 80, left hemisphere 57.4
1891 Female, age 85, both hemispheres 45.7
2436 Male, age 74, both hemispheres 45.1
2620 Female, age 94, left hemisphere 44.0
2861 Female, age 67, both hemispheres 35.7
Parahippocampal cortex
nTPM: 47.8
1850 Male, age 80, both hemispheres 69.1
1990 Female, age 91, right hemisphere 52.3
1933 Female, age 85, both hemispheres 48.6
2693 Female, age 94, both hemispheres 47.7
2018 Male, age 76, both hemispheres 46.7
2245 Female, age 91, both hemispheres 44.7
2692 Male, age 74, both hemispheres 44.7
2250 Female, age 67, right hemisphere 43.4
2532 Female, age 72, left hemisphere 42.1
2622 Female, age 67, right hemisphere 38.5
Perirhinal gyrus
nTPM: 58.1
1847 Female, age 91, left hemisphere 68.2
1794 Male, age 80, right hemisphere 66.3
1841 Female, age 85, right hemisphere 57.9
2521 Female, age 94, right hemisphere 51.8
2848 Male, age 76, right hemisphere 46.1
Subiculum
nTPM: 44.7
1901 Male, age 80, both hemispheres 56.4
1977 Female, age 85, both hemispheres 48.0
2619 Male, age 74, both hemispheres 42.7
2042 Male, age 76, both hemispheres 42.1
2729 Female, age 91, right hemisphere 39.9
2438 Female, age 94, left hemisphere 39.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.0
Samples: 197

Max nTPM: 64.1
Min nTPM: 18.0
Std nTPM: 6.5
Median nTPM: 32.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 64.1
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 50.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 49.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 49.4
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 47.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 47.5
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 46.9
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 46.6
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 46.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 45.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 45.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.4
FF:10169-103B7 60 years, female 40.5
FF:10153-102I9 76 years, female 24.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 37.9
Pig sample Sample description nTPM
Subiculum
nTPM: 32.9
Samples: 4

Max nTPM: 38.8
Min nTPM: 29.6
Sample A Female 38.8
Sample B Female 29.6
Sample C Male 32.4
Sample D Male 30.9
Dorsal hippocampus
nTPM: 37.3
Samples: 4

Max nTPM: 44.9
Min nTPM: 30.1
Sample A Female 44.9
Sample B Female 39.5
Sample C Male 34.6
Sample D Male 30.1
Entorhinal cortex
nTPM: 33.0
Samples: 4

Max nTPM: 36.3
Min nTPM: 29.2
Sample A Female 34.0
Sample B Female 36.3
Sample C Male 32.4
Sample D Male 29.2
Ventral hippocampus
nTPM: 38.0
Samples: 4

Max nTPM: 43.2
Min nTPM: 27.4
Sample A Female 39.5
Sample B Female 27.4
Sample C Male 43.2
Sample D Male 41.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 274.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 274.8
Samples: 4

Max nTPM: 302.9
Min nTPM: 238.4
Sample A Male 238.4
Sample B Male 284.5
Sample C Female 273.3
Sample D Female 302.9
Hippocampal formation
nTPM: 254.4
Samples: 4

Max nTPM: 291.3
Min nTPM: 233.6
Sample A Male 291.3
Sample B Male 244.8
Sample C Female 233.6
Sample D Female 247.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 24.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 24.7
69013560 Antisense, RP_050309_02_E10, Mouse strain C57BL/6J (56 days, male) 24.7

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