HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:56.9 nTPM
HPA Brain:74.7 nTPM
GTEx:56.9 nTPM
FANTOM5:99.9 Scaled Tags Per Million
Pig:103.9 nTPM
Mouse:106.0 nTPM
Allen mouse:17.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 74.7
Sample id Sample description nTPM
Hippocampus
nTPM: 74.7
2529 Female, age 94, left hemisphere 77.5
2148 Female, age 91, left hemisphere 76.8
2621 Female, age 67, right hemisphere 76.7
1898 Male, age 80, left hemisphere 73.5
1855 Male, age 76, left hemisphere 72.4
1911 Female, age 85, right hemisphere 71.3
Dentate gyrus
nTPM: 69.1
2530 Female, age 94, left hemisphere 78.5
1927 Female, age 91, both hemispheres 70.4
2246 Female, age 85, both hemispheres 70.3
2010 Male, age 76, both hemispheres 68.0
2531 Female, age 67, both hemispheres 67.7
2528 Male, age 74, both hemispheres 59.4
Entorhinal gyrus
nTPM: 69.8
2686 Male, age 75, right hemisphere 74.1
1938 Female, age 85, left hemisphere 74.0
2117 Female, age 91, right hemisphere 73.2
2613 Female, age 94, left hemisphere 67.0
1787 Male, age 76, left hemisphere 66.7
2764 Male, age 80, right hemisphere 63.6
Hippocampus, CA1
nTPM: 73.4
2749 Male, age 80, left hemisphere 81.5
2045 Male, age 76, both hemispheres 81.0
1873 Female, age 85, both hemispheres 76.6
2527 Male, age 74, both hemispheres 69.3
2082 Female, age 91, right hemisphere 58.6
Hippocampus, CA2
nTPM: 68.8
1892 Male, age 76, both hemispheres 85.5
1963 Male, age 80, left hemisphere 83.2
1940 Female, age 85, left hemisphere 62.8
2113 Female, age 91, right hemisphere 60.9
2437 Female, age 94, left hemisphere 60.7
2249 Male, age 74, both hemispheres 59.7
Hippocampus, CA3
nTPM: 68.1
2137 Male, age 80, left hemisphere 81.2
1891 Female, age 85, both hemispheres 74.5
1867 Male, age 76, both hemispheres 69.6
2620 Female, age 94, left hemisphere 62.3
2861 Female, age 67, both hemispheres 62.0
2436 Male, age 74, both hemispheres 59.3
Parahippocampal cortex
nTPM: 66.1
1850 Male, age 80, both hemispheres 73.8
2532 Female, age 72, left hemisphere 72.6
2245 Female, age 91, both hemispheres 67.8
2692 Male, age 74, both hemispheres 66.6
2018 Male, age 76, both hemispheres 65.1
1933 Female, age 85, both hemispheres 64.8
1990 Female, age 91, right hemisphere 64.1
2622 Female, age 67, right hemisphere 63.1
2250 Female, age 67, right hemisphere 62.4
2693 Female, age 94, both hemispheres 60.3
Perirhinal gyrus
nTPM: 68.7
2848 Male, age 76, right hemisphere 73.5
1847 Female, age 91, left hemisphere 71.9
1841 Female, age 85, right hemisphere 70.9
1794 Male, age 80, right hemisphere 68.3
2521 Female, age 94, right hemisphere 59.1
Subiculum
nTPM: 69.4
2438 Female, age 94, left hemisphere 77.5
1977 Female, age 85, both hemispheres 74.1
1901 Male, age 80, both hemispheres 72.7
2619 Male, age 74, both hemispheres 64.8
2729 Female, age 91, right hemisphere 64.0
2042 Male, age 76, both hemispheres 63.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 56.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 56.9
Samples: 197

Max nTPM: 96.7
Min nTPM: 15.0
Std nTPM: 10.6
Median nTPM: 55.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 96.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 94.9
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 94.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 94.3
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 85.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 80.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 78.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 77.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 77.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 76.4
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 76.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 99.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 99.9
FF:10169-103B7 60 years, female 104.8
FF:10153-102I9 76 years, female 95.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 103.9
Pig sample Sample description nTPM
Subiculum
nTPM: 96.5
Samples: 4

Max nTPM: 123.8
Min nTPM: 85.3
Sample A Female 123.8
Sample B Female 90.7
Sample C Male 85.3
Sample D Male 86.2
Dorsal hippocampus
nTPM: 95.0
Samples: 4

Max nTPM: 102.5
Min nTPM: 90.4
Sample A Female 102.5
Sample B Female 96.2
Sample C Male 91.0
Sample D Male 90.4
Entorhinal cortex
nTPM: 104.0
Samples: 4

Max nTPM: 109.9
Min nTPM: 95.4
Sample A Female 103.2
Sample B Female 109.9
Sample C Male 107.3
Sample D Male 95.4
Ventral hippocampus
nTPM: 85.7
Samples: 4

Max nTPM: 96.8
Min nTPM: 81.0
Sample A Female 81.0
Sample B Female 81.6
Sample C Male 83.2
Sample D Male 96.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 106.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 106.1
Samples: 4

Max nTPM: 114.2
Min nTPM: 98.2
Sample A Male 102.6
Sample B Male 114.2
Sample C Female 98.2
Sample D Female 109.2
Hippocampal formation
nTPM: 103.5
Samples: 4

Max nTPM: 112.6
Min nTPM: 93.5
Sample A Male 112.6
Sample B Male 109.8
Sample C Female 93.5
Sample D Female 98.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.8
67792192 Antisense, RP_040920_01_C10, Mouse strain C57BL/6J (56 days, male) 18.4
70743906 Antisense, RP_050725_02_A10, Mouse strain C57BL/6J (56 days, male) 17.1

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