HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:7.1 nTPM
HPA Brain:26.4 nTPM
GTEx:7.1 nTPM
FANTOM5:9.5 Scaled Tags Per Million
Pig:13.2 nTPM
Mouse:9.8 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038712Antibody HPA058727
Glial cells Not detectedNot detected
Neuronal cells MediumLow



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.4
Sample id Sample description nTPM
Hippocampus
nTPM: 19.7
2529 Female, age 94, left hemisphere 25.7
2621 Female, age 67, right hemisphere 22.5
2148 Female, age 91, left hemisphere 20.6
1911 Female, age 85, right hemisphere 17.8
1855 Male, age 76, left hemisphere 16.1
1898 Male, age 80, left hemisphere 15.7
Dentate gyrus
nTPM: 20.8
2531 Female, age 67, both hemispheres 28.0
2530 Female, age 94, left hemisphere 23.0
2528 Male, age 74, both hemispheres 21.8
2246 Female, age 85, both hemispheres 18.4
2010 Male, age 76, both hemispheres 18.1
1927 Female, age 91, both hemispheres 15.3
Entorhinal gyrus
nTPM: 26.4
2613 Female, age 94, left hemisphere 36.8
2686 Male, age 75, right hemisphere 33.1
2764 Male, age 80, right hemisphere 24.9
2117 Female, age 91, right hemisphere 23.3
1787 Male, age 76, left hemisphere 21.3
1938 Female, age 85, left hemisphere 18.9
Hippocampus, CA1
nTPM: 17.3
2082 Female, age 91, right hemisphere 22.4
2527 Male, age 74, both hemispheres 19.7
1873 Female, age 85, both hemispheres 15.5
2045 Male, age 76, both hemispheres 15.5
2749 Male, age 80, left hemisphere 13.3
Hippocampus, CA2
nTPM: 20.0
2437 Female, age 94, left hemisphere 30.3
2249 Male, age 74, both hemispheres 21.0
2113 Female, age 91, right hemisphere 19.8
1940 Female, age 85, left hemisphere 18.1
1963 Male, age 80, left hemisphere 16.3
1892 Male, age 76, both hemispheres 14.4
Hippocampus, CA3
nTPM: 20.3
2620 Female, age 94, left hemisphere 28.3
2861 Female, age 67, both hemispheres 26.9
1891 Female, age 85, both hemispheres 18.7
2436 Male, age 74, both hemispheres 18.2
1867 Male, age 76, both hemispheres 16.5
2137 Male, age 80, left hemisphere 12.9
Parahippocampal cortex
nTPM: 23.3
2622 Female, age 67, right hemisphere 30.9
2692 Male, age 74, both hemispheres 28.8
2532 Female, age 72, left hemisphere 26.9
1990 Female, age 91, right hemisphere 25.2
2693 Female, age 94, both hemispheres 24.4
2250 Female, age 67, right hemisphere 21.2
2245 Female, age 91, both hemispheres 20.9
2018 Male, age 76, both hemispheres 18.8
1850 Male, age 80, both hemispheres 18.6
1933 Female, age 85, both hemispheres 17.1
Perirhinal gyrus
nTPM: 19.2
2521 Female, age 94, right hemisphere 23.3
2848 Male, age 76, right hemisphere 19.6
1794 Male, age 80, right hemisphere 19.0
1847 Female, age 91, left hemisphere 17.5
1841 Female, age 85, right hemisphere 16.5
Subiculum
nTPM: 25.5
2438 Female, age 94, left hemisphere 31.5
2619 Male, age 74, both hemispheres 29.4
2042 Male, age 76, both hemispheres 25.6
1901 Male, age 80, both hemispheres 24.4
2729 Female, age 91, right hemisphere 22.5
1977 Female, age 85, both hemispheres 19.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 7.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.1
Samples: 197

Max nTPM: 15.0
Min nTPM: 3.2
Std nTPM: 1.7
Median nTPM: 6.9
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 15.0
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 13.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 12.4
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 11.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 10.9
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 10.3
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 10.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 10.2
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 10.2
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 10.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 9.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.5
FF:10153-102I9 76 years, female 11.8
FF:10169-103B7 60 years, female 7.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.2
Pig sample Sample description nTPM
Subiculum
nTPM: 8.9
Samples: 4

Max nTPM: 11.5
Min nTPM: 7.8
Sample A Female 11.5
Sample B Female 7.8
Sample C Male 8.2
Sample D Male 8.1
Dorsal hippocampus
nTPM: 6.6
Samples: 4

Max nTPM: 7.2
Min nTPM: 6.2
Sample A Female 6.6
Sample B Female 6.2
Sample C Male 7.2
Sample D Male 6.3
Entorhinal cortex
nTPM: 13.2
Samples: 4

Max nTPM: 14.0
Min nTPM: 12.3
Sample A Female 14.0
Sample B Female 12.3
Sample C Male 13.3
Sample D Male 13.1
Ventral hippocampus
nTPM: 6.6
Samples: 4

Max nTPM: 9.9
Min nTPM: 5.0
Sample A Female 6.2
Sample B Female 5.3
Sample C Male 9.9
Sample D Male 5.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.8
Samples: 4

Max nTPM: 10.4
Min nTPM: 9.2
Sample A Male 9.2
Sample B Male 10.4
Sample C Female 9.2
Sample D Female 10.4
Hippocampal formation
nTPM: 7.6
Samples: 4

Max nTPM: 8.2
Min nTPM: 6.1
Sample A Male 6.1
Sample B Male 8.2
Sample C Female 7.9
Sample D Female 8.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
69782581 Antisense, RP_050505_03_C11, Mouse strain C57BL/6J (56 days, male) 1.1
73997146 Antisense, RP_051214_03_F05, Mouse strain C57BL/6J (56 days, male) 0.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org