HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:22.3 nTPM
HPA Brain:47.4 nTPM
GTEx:22.3 nTPM
FANTOM5:97.5 Scaled Tags Per Million
Pig:52.4 nTPM
Mouse:129.9 nTPM
Allen mouse:6.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB070844
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 47.4
Sample id Sample description nTPM
Hippocampus
nTPM: 39.9
1898 Male, age 80, left hemisphere 50.3
2529 Female, age 94, left hemisphere 39.5
2621 Female, age 67, right hemisphere 38.8
2148 Female, age 91, left hemisphere 38.1
1911 Female, age 85, right hemisphere 36.8
1855 Male, age 76, left hemisphere 35.8
Dentate gyrus
nTPM: 38.7
1927 Female, age 91, both hemispheres 46.6
2010 Male, age 76, both hemispheres 42.1
2528 Male, age 74, both hemispheres 39.3
2246 Female, age 85, both hemispheres 36.2
2530 Female, age 94, left hemisphere 34.9
2531 Female, age 67, both hemispheres 32.9
Entorhinal gyrus
nTPM: 39.8
2764 Male, age 80, right hemisphere 44.5
1938 Female, age 85, left hemisphere 41.5
2117 Female, age 91, right hemisphere 39.7
1787 Male, age 76, left hemisphere 38.7
2613 Female, age 94, left hemisphere 38.2
2686 Male, age 75, right hemisphere 35.9
Hippocampus, CA1
nTPM: 44.6
2749 Male, age 80, left hemisphere 59.7
2527 Male, age 74, both hemispheres 45.5
1873 Female, age 85, both hemispheres 43.4
2082 Female, age 91, right hemisphere 37.7
2045 Male, age 76, both hemispheres 36.5
Hippocampus, CA2
nTPM: 42.4
1963 Male, age 80, left hemisphere 50.6
1892 Male, age 76, both hemispheres 47.2
2249 Male, age 74, both hemispheres 46.6
2113 Female, age 91, right hemisphere 38.1
1940 Female, age 85, left hemisphere 37.9
2437 Female, age 94, left hemisphere 34.2
Hippocampus, CA3
nTPM: 43.5
2436 Male, age 74, both hemispheres 63.7
2137 Male, age 80, left hemisphere 48.6
1867 Male, age 76, both hemispheres 41.9
1891 Female, age 85, both hemispheres 40.2
2620 Female, age 94, left hemisphere 34.3
2861 Female, age 67, both hemispheres 32.1
Parahippocampal cortex
nTPM: 41.6
1850 Male, age 80, both hemispheres 51.5
1990 Female, age 91, right hemisphere 44.9
2250 Female, age 67, right hemisphere 42.7
1933 Female, age 85, both hemispheres 41.4
2693 Female, age 94, both hemispheres 41.1
2692 Male, age 74, both hemispheres 40.9
2245 Female, age 91, both hemispheres 40.7
2532 Female, age 72, left hemisphere 40.1
2018 Male, age 76, both hemispheres 38.4
2622 Female, age 67, right hemisphere 34.1
Perirhinal gyrus
nTPM: 47.4
1847 Female, age 91, left hemisphere 55.8
1794 Male, age 80, right hemisphere 51.1
1841 Female, age 85, right hemisphere 49.2
2521 Female, age 94, right hemisphere 41.2
2848 Male, age 76, right hemisphere 39.9
Subiculum
nTPM: 39.0
1901 Male, age 80, both hemispheres 45.4
1977 Female, age 85, both hemispheres 44.8
2729 Female, age 91, right hemisphere 38.6
2619 Male, age 74, both hemispheres 38.3
2042 Male, age 76, both hemispheres 36.3
2438 Female, age 94, left hemisphere 30.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.3
Samples: 197

Max nTPM: 40.1
Min nTPM: 8.4
Std nTPM: 5.8
Median nTPM: 22.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 40.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 37.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 34.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 34.5
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 34.0
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 33.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 33.1
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 32.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 32.4
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 32.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 32.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 97.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 97.5
FF:10169-103B7 60 years, female 113.2
FF:10153-102I9 76 years, female 81.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 52.4
Pig sample Sample description nTPM
Subiculum
nTPM: 46.0
Samples: 4

Max nTPM: 57.3
Min nTPM: 41.3
Sample A Female 57.3
Sample B Female 42.7
Sample C Male 41.3
Sample D Male 42.8
Dorsal hippocampus
nTPM: 51.3
Samples: 4

Max nTPM: 59.5
Min nTPM: 40.8
Sample A Female 59.5
Sample B Female 51.9
Sample C Male 53.0
Sample D Male 40.8
Entorhinal cortex
nTPM: 52.4
Samples: 4

Max nTPM: 65.7
Min nTPM: 42.8
Sample A Female 52.4
Sample B Female 65.7
Sample C Male 48.6
Sample D Male 42.8
Ventral hippocampus
nTPM: 46.6
Samples: 4

Max nTPM: 56.9
Min nTPM: 39.0
Sample A Female 56.9
Sample B Female 39.0
Sample C Male 46.8
Sample D Male 43.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 129.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 121.1
Samples: 4

Max nTPM: 123.9
Min nTPM: 117.9
Sample A Male 117.9
Sample B Male 123.9
Sample C Female 122.7
Sample D Female 119.8
Hippocampal formation
nTPM: 130.0
Samples: 4

Max nTPM: 142.2
Min nTPM: 120.1
Sample A Male 142.2
Sample B Male 125.3
Sample C Female 132.2
Sample D Female 120.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.8
100144161 Antisense, RP_110421_01_A11, Mouse strain C57BL/6J (56 days, male) 8.2
2421 Antisense, RP_040407_02_D12, Mouse strain C57BL/6J (56 days, male) 5.4

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