HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:47.4 nTPM
HPA Brain:92.2 nTPM
GTEx:47.4 nTPM
FANTOM5:399.8 Scaled Tags Per Million
Pig:94.4 nTPM
Mouse:107.1 nTPM
Allen mouse:6.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027320Antibody HPA055557
Glial cells LowNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 92.2
Sample id Sample description nTPM
Hippocampus
nTPM: 74.1
1898 Male, age 80, left hemisphere 99.6
2529 Female, age 94, left hemisphere 72.9
1855 Male, age 76, left hemisphere 72.3
2621 Female, age 67, right hemisphere 70.0
1911 Female, age 85, right hemisphere 65.1
2148 Female, age 91, left hemisphere 64.8
Dentate gyrus
nTPM: 75.1
2010 Male, age 76, both hemispheres 99.5
1927 Female, age 91, both hemispheres 85.4
2246 Female, age 85, both hemispheres 73.2
2530 Female, age 94, left hemisphere 70.1
2528 Male, age 74, both hemispheres 68.6
2531 Female, age 67, both hemispheres 53.6
Entorhinal gyrus
nTPM: 70.7
1938 Female, age 85, left hemisphere 84.8
2764 Male, age 80, right hemisphere 77.1
1787 Male, age 76, left hemisphere 74.8
2613 Female, age 94, left hemisphere 65.5
2117 Female, age 91, right hemisphere 64.8
2686 Male, age 75, right hemisphere 57.2
Hippocampus, CA1
nTPM: 92.2
2749 Male, age 80, left hemisphere 143.4
1873 Female, age 85, both hemispheres 91.7
2045 Male, age 76, both hemispheres 86.2
2527 Male, age 74, both hemispheres 77.3
2082 Female, age 91, right hemisphere 62.6
Hippocampus, CA2
nTPM: 81.5
1892 Male, age 76, both hemispheres 114.3
1963 Male, age 80, left hemisphere 94.8
2249 Male, age 74, both hemispheres 84.5
1940 Female, age 85, left hemisphere 72.0
2437 Female, age 94, left hemisphere 62.4
2113 Female, age 91, right hemisphere 60.9
Hippocampus, CA3
nTPM: 79.3
2137 Male, age 80, left hemisphere 108.8
1867 Male, age 76, both hemispheres 106.9
2436 Male, age 74, both hemispheres 71.3
2620 Female, age 94, left hemisphere 66.2
1891 Female, age 85, both hemispheres 65.7
2861 Female, age 67, both hemispheres 57.2
Parahippocampal cortex
nTPM: 73.6
1850 Male, age 80, both hemispheres 88.5
2250 Female, age 67, right hemisphere 84.3
2245 Female, age 91, both hemispheres 83.6
2018 Male, age 76, both hemispheres 76.7
1990 Female, age 91, right hemisphere 75.2
1933 Female, age 85, both hemispheres 75.1
2532 Female, age 72, left hemisphere 70.8
2693 Female, age 94, both hemispheres 63.4
2622 Female, age 67, right hemisphere 63.2
2692 Male, age 74, both hemispheres 55.3
Perirhinal gyrus
nTPM: 85.5
1794 Male, age 80, right hemisphere 98.6
1847 Female, age 91, left hemisphere 91.3
1841 Female, age 85, right hemisphere 87.0
2521 Female, age 94, right hemisphere 77.4
2848 Male, age 76, right hemisphere 73.4
Subiculum
nTPM: 70.3
1901 Male, age 80, both hemispheres 79.9
1977 Female, age 85, both hemispheres 78.2
2042 Male, age 76, both hemispheres 73.7
2619 Male, age 74, both hemispheres 65.3
2729 Female, age 91, right hemisphere 62.5
2438 Female, age 94, left hemisphere 61.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 47.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.4
Samples: 197

Max nTPM: 92.7
Min nTPM: 22.8
Std nTPM: 15.7
Median nTPM: 43.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 92.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 89.7
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 89.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 86.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 85.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 85.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 85.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 84.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 79.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 79.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 79.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 399.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 399.8
FF:10169-103B7 60 years, female 546.2
FF:10153-102I9 76 years, female 253.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 94.4
Pig sample Sample description nTPM
Subiculum
nTPM: 80.5
Samples: 4

Max nTPM: 98.0
Min nTPM: 70.9
Sample A Female 98.0
Sample B Female 75.5
Sample C Male 77.4
Sample D Male 70.9
Dorsal hippocampus
nTPM: 94.4
Samples: 4

Max nTPM: 122.3
Min nTPM: 69.5
Sample A Female 122.3
Sample B Female 98.1
Sample C Male 87.8
Sample D Male 69.5
Entorhinal cortex
nTPM: 73.9
Samples: 4

Max nTPM: 86.7
Min nTPM: 59.9
Sample A Female 74.4
Sample B Female 86.7
Sample C Male 74.5
Sample D Male 59.9
Ventral hippocampus
nTPM: 88.4
Samples: 4

Max nTPM: 103.0
Min nTPM: 68.5
Sample A Female 103.0
Sample B Female 68.5
Sample C Male 95.5
Sample D Male 86.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 107.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 100.3
Samples: 4

Max nTPM: 104.0
Min nTPM: 97.5
Sample A Male 97.5
Sample B Male 100.5
Sample C Female 99.0
Sample D Female 104.0
Hippocampal formation
nTPM: 107.1
Samples: 4

Max nTPM: 114.3
Min nTPM: 96.6
Sample A Male 114.3
Sample B Male 107.5
Sample C Female 109.9
Sample D Female 96.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.7
69816936 Antisense, RP_050510_02_C05, Mouse strain C57BL/6J (56 days, male) 13.3
70795527 Antisense, RP_050712_01_G05, Mouse strain C57BL/6J (56 days, male) 0.0

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