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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
45.0
nTPM
HPA Brain:
103.5
nTPM
GTEx:
45.0
nTPM
FANTOM5:
190.4
Scaled Tags Per Million
Pig:
113.3
nTPM
Mouse:
96.0
nTPM
Allen mouse:
4.4
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
103.5
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 85.1
2019
Male, age 18, unknown
98.4
2411
Female, age 72, unknown
96.5
1870
Female, age 42, unknown
95.8
1830
Male, age 51, unknown
95.1
1833
Male, age 53, unknown
92.8
2828
Female, age 72, unknown
82.5
2666
Male, age 74, left hemisphere
81.1
1827
Male, age 72, unknown
72.8
2586
Male, age 75, left hemisphere
69.1
2219
Male, age 76, both hemispheres
67.4
Dorsal raphe nucleus nTPM: 71.3
2750
Male, age 76, both hemispheres
90.0
1828
Male, age 53, unknown
72.4
2016
Female, age 72, unknown
70.6
2047
Male, age 72, unknown
64.4
2298
Female, age 72, unknown
58.9
Inferior colliculus nTPM: 67.5
1890
Male, age 53, unknown
71.5
2097
Female, age 72, unknown
69.4
1848
Female, age 42, unknown
66.8
2849
Male, age 72, unknown
62.2
Median raphe nucleus nTPM: 70.7
2220
Male, age 76, midline
70.7
Periaquaductal grey, anterior nTPM: 66.6
2502
Female, age 75, unknown
80.2
1947
Male, age 18, unknown
63.3
1795
Male, age 51, unknown
56.3
Periaquaductal grey, dorsal nTPM: 62.9
2464
Female, age 72, unknown
74.0
2850
Male, age 76, both hemispheres
61.3
1831
Male, age 72, unknown
60.1
1840
Male, age 53, unknown
56.3
Periaquaductal grey, lateral nTPM: 63.7
2140
Male, age 76, both hemispheres
64.2
2053
Male, age 18, unknown
63.6
2272
Male, age 74, both hemispheres
63.3
Pretectal area nTPM: 67.5
2407
Male, age 75, both hemispheres
78.8
1817
Female, age 42, unknown
77.5
1815
Male, age 53, unknown
76.8
2316
Male, age 76, right hemisphere
73.1
2007
Male, age 72, unknown
69.8
2825
Male, age 18, unknown
67.4
2667
Female, age 75, unknown
64.6
2273
Male, age 74, both hemispheres
63.2
2224
Female, age 72, unknown
59.0
1944
Female, age 72, unknown
56.5
1816
Male, age 51, unknown
56.3
Red nucleus nTPM: 103.5
1865
Male, age 51, unknown
124.8
1904
Male, age 53, unknown
118.5
2769
Male, age 72, unknown
110.4
2227
Male, age 72, unknown
109.4
1821
Female, age 72, unknown
107.9
1954
Female, age 42, unknown
107.2
2503
Female, age 72, unknown
105.7
2823
Male, age 76, right hemisphere
103.7
2785
Male, age 18, unknown
103.3
2588
Male, age 74, left hemisphere
90.9
2584
Male, age 75, left hemisphere
83.6
2725
Female, age 75, unknown
76.1
Substantia nigra nTPM: 76.7
2590
Female, age 75, unknown
85.5
2583
Male, age 75, right hemisphere
81.8
1851
Male, age 51, unknown
81.5
2409
Female, age 72, unknown
81.2
2241
Male, age 72, unknown
80.0
2699
Male, age 18, unknown
74.8
1916
Female, age 42, unknown
73.4
2665
Male, age 74, both hemispheres
72.7
1889
Female, age 72, unknown
71.1
1941
Male, age 53, unknown
65.4
Superior colliculus nTPM: 73.8
1913
Female, age 42, unknown
88.3
1995
Male, age 72, unknown
84.0
2587
Male, age 74, left hemisphere
82.9
2668
Female, age 75, unknown
75.4
1839
Male, age 51, unknown
73.0
2664
Male, age 75, both hemispheres
71.8
1895
Male, age 76, right hemisphere
68.6
2261
Male, age 18, unknown
66.3
1796
Male, age 53, unknown
65.4
2087
Female, age 72, unknown
61.8
Ventral tegmental area nTPM: 76.1
2223
Female, age 72, unknown
94.7
2410
Female, age 72, unknown
79.6
1942
Male, age 51, unknown
72.3
1915
Female, age 42, unknown
71.5
2021
Male, age 53, unknown
69.6
2218
Male, age 76, both hemispheres
69.2
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
45.0
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 45.0
Samples: 139
Max nTPM: 111.1
Min nTPM: 22.6
Std nTPM: 13.7
Median nTPM: 41.6
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
111.1
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
106.0
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
78.8
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
78.2
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
76.2
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
75.9
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
74.0
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
72.2
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
69.3
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
68.3
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
68.1
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
67.8
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
65.1
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
63.6
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
61.2
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
59.3
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
58.9
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
58.5
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
56.5
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
56.0
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
55.4
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
55.3
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
55.1
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
55.1
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
54.5
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
54.2
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
53.2
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
52.8
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
52.4
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
52.3
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
51.9
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
51.8
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
50.5
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
50.2
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
49.9
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
49.8
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
49.5
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
49.2
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
48.3
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
48.3
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
48.0
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
48.0
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
47.9
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
47.5
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
47.3
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
47.2
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
47.1
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
46.3
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
46.0
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
45.7
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
45.6
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
45.3
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
45.1
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
44.6
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
44.5
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
43.8
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
43.6
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
43.4
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
43.2
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
43.1
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
43.0
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
42.7
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
42.4
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
42.3
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
42.1
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
41.9
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
41.9
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
41.8
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
41.7
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
41.6
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
41.5
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
41.2
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
41.1
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
40.9
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
40.9
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
40.5
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
40.5
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
39.9
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
39.9
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
39.8
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
39.6
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
39.6
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
39.5
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
39.4
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
39.4
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
38.9
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
38.8
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
38.7
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
38.7
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
38.6
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
38.5
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
38.2
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
37.7
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
37.7
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
37.6
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
37.5
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
37.2
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
37.2
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
37.0
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
36.8
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
36.7
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
36.6
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
36.5
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
36.3
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
36.1
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
36.0
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
36.0
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
35.9
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
35.8
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
35.5
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
35.5
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
35.3
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
35.2
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
35.1
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
35.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
35.0
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
34.8
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
34.4
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
34.4
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
34.2
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
34.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
33.8
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
33.5
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
33.0
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
32.9
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
32.3
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
31.8
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
31.7
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
31.6
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
31.5
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
30.5
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
29.4
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
28.8
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
28.7
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
28.5
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
28.3
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
27.3
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
26.0
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
22.6
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
96.0
Mouse sample
Sample description
nTPM
Midbrain nTPM: 96.0
Samples: 4
Max nTPM: 97.6
Min nTPM: 94.4
Sample A
Male
97.6
Sample B
Male
94.4
Sample C
Female
97.4
Sample D
Female
94.5
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.