HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:38.5 nTPM
HPA Brain:83.7 nTPM
GTEx:38.5 nTPM
FANTOM5:144.9 Scaled Tags Per Million
Pig:70.1 nTPM
Mouse:58.5 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019669Antibody HPA024235Antibody HPA024691Antibody CAB004549
Glial cells HighNot detectedLowNot detected
Neuronal cells HighMediumMediumMedium









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 83.7
Sample id Sample description nTPM
Hippocampus
nTPM: 82.9
2529 Female, age 94, left hemisphere 91.2
1898 Male, age 80, left hemisphere 84.2
2148 Female, age 91, left hemisphere 82.2
1911 Female, age 85, right hemisphere 81.9
2621 Female, age 67, right hemisphere 79.2
1855 Male, age 76, left hemisphere 78.6
Dentate gyrus
nTPM: 82.1
2530 Female, age 94, left hemisphere 95.4
1927 Female, age 91, both hemispheres 83.7
2246 Female, age 85, both hemispheres 83.0
2010 Male, age 76, both hemispheres 79.9
2531 Female, age 67, both hemispheres 77.9
2528 Male, age 74, both hemispheres 72.5
Entorhinal gyrus
nTPM: 80.4
2686 Male, age 75, right hemisphere 87.5
2117 Female, age 91, right hemisphere 82.6
2764 Male, age 80, right hemisphere 82.0
1938 Female, age 85, left hemisphere 79.9
1787 Male, age 76, left hemisphere 79.1
2613 Female, age 94, left hemisphere 71.6
Hippocampus, CA1
nTPM: 83.7
2749 Male, age 80, left hemisphere 103.3
1873 Female, age 85, both hemispheres 88.1
2527 Male, age 74, both hemispheres 80.8
2045 Male, age 76, both hemispheres 76.8
2082 Female, age 91, right hemisphere 69.3
Hippocampus, CA2
nTPM: 83.2
1892 Male, age 76, both hemispheres 96.9
1963 Male, age 80, left hemisphere 91.1
1940 Female, age 85, left hemisphere 87.6
2437 Female, age 94, left hemisphere 78.8
2113 Female, age 91, right hemisphere 76.8
2249 Male, age 74, both hemispheres 68.0
Hippocampus, CA3
nTPM: 80.4
2137 Male, age 80, left hemisphere 95.0
1891 Female, age 85, both hemispheres 85.7
1867 Male, age 76, both hemispheres 82.9
2620 Female, age 94, left hemisphere 80.3
2861 Female, age 67, both hemispheres 72.6
2436 Male, age 74, both hemispheres 66.1
Parahippocampal cortex
nTPM: 83.4
1850 Male, age 80, both hemispheres 93.6
2532 Female, age 72, left hemisphere 93.3
2692 Male, age 74, both hemispheres 88.4
2245 Female, age 91, both hemispheres 84.5
1990 Female, age 91, right hemisphere 83.3
2018 Male, age 76, both hemispheres 81.7
2693 Female, age 94, both hemispheres 81.4
1933 Female, age 85, both hemispheres 78.9
2622 Female, age 67, right hemisphere 74.8
2250 Female, age 67, right hemisphere 73.6
Perirhinal gyrus
nTPM: 81.8
1794 Male, age 80, right hemisphere 83.4
2848 Male, age 76, right hemisphere 83.4
1841 Female, age 85, right hemisphere 82.7
1847 Female, age 91, left hemisphere 82.4
2521 Female, age 94, right hemisphere 77.3
Subiculum
nTPM: 82.8
2438 Female, age 94, left hemisphere 90.5
1901 Male, age 80, both hemispheres 89.2
2619 Male, age 74, both hemispheres 83.8
2042 Male, age 76, both hemispheres 82.2
1977 Female, age 85, both hemispheres 77.3
2729 Female, age 91, right hemisphere 73.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.5
Samples: 197

Max nTPM: 81.4
Min nTPM: 21.8
Std nTPM: 9.3
Median nTPM: 36.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 81.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 79.0
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 78.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 67.7
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 63.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 59.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 57.8
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 57.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 56.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 56.6
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 55.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 144.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 144.9
FF:10169-103B7 60 years, female 166.1
FF:10153-102I9 76 years, female 123.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 70.1
Pig sample Sample description nTPM
Subiculum
nTPM: 70.1
Samples: 4

Max nTPM: 82.9
Min nTPM: 64.2
Sample A Female 82.9
Sample B Female 64.2
Sample C Male 66.7
Sample D Male 66.7
Dorsal hippocampus
nTPM: 69.8
Samples: 4

Max nTPM: 78.2
Min nTPM: 59.2
Sample A Female 78.2
Sample B Female 65.3
Sample C Male 76.6
Sample D Male 59.2
Entorhinal cortex
nTPM: 69.1
Samples: 4

Max nTPM: 70.7
Min nTPM: 66.0
Sample A Female 66.0
Sample B Female 70.7
Sample C Male 70.2
Sample D Male 69.5
Ventral hippocampus
nTPM: 63.4
Samples: 4

Max nTPM: 72.4
Min nTPM: 53.4
Sample A Female 65.5
Sample B Female 53.4
Sample C Male 62.2
Sample D Male 72.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 58.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.6
Samples: 4

Max nTPM: 66.0
Min nTPM: 53.0
Sample A Male 53.0
Sample B Male 59.0
Sample C Female 56.2
Sample D Female 66.0
Hippocampal formation
nTPM: 54.8
Samples: 4

Max nTPM: 57.7
Min nTPM: 49.1
Sample A Male 55.2
Sample B Male 57.7
Sample C Female 57.0
Sample D Female 49.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
70812877 Antisense, RP_050712_02_G09, Mouse strain C57BL/6J (56 days, male) 2.0
71920504 Antisense, RP_050915_02_C01, Mouse strain C57BL/6J (56 days, male) 1.3

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