We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RABEP1
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Cluster
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Interacting gene
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • RABEP1
IMMUNE CELL MONOCYTES Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cell proteome
Monocytes
MONOCYTES - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA:51.6 nTPM
Monaco:86.8 nTPM
Schmiedel:73.0 TPM

MONOCYTES - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM 51.6
HPA sample nTPM
Classical monocyte
nTPM: 21.3
Samples: 6

Max nTPM: 28.9
Min nTPM: 13.6
P10809_1003 13.6
P10809_1020 17.6
P10809_1039 26.3
P10809_1058 28.9
P10809_1080 23.0
P10809_1107 18.1
Intermediate monocyte
nTPM: 22.9
Samples: 6

Max nTPM: 27.5
Min nTPM: 16.8
P10809_1004 18.3
P10809_1023 26.8
P10809_1042 27.5
P10809_1061 24.0
P10809_1081 23.9
P10809_1108 16.8
Non-classical monocyte
nTPM: 51.6
Samples: 5

Max nTPM: 117.5
Min nTPM: 23.1
P10809_1005 23.1
P10809_1053 33.4
P10809_1072 117.5
P10809_1082 55.9
P10809_1109 28.3

MONOCYTES - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max nTPM 86.8
Monaco sample nTPM
Classical monocyte
nTPM: 36.0
Samples: 4

Max nTPM: 40.6
Min nTPM: 29.2
RHH5313_R3680 37.2
RHH5221_R3593 37.0
RHH5250_R3622 40.6
RHH5279_R3651 29.2
Intermediate monocyte
nTPM: 51.0
Samples: 4

Max nTPM: 64.3
Min nTPM: 37.7
RHH5314_R3681 64.3
RHH5222_R3594 52.3
RHH5251_R3623 37.7
RHH5280_R3652 49.7
Non-classical monocyte
nTPM: 86.8
Samples: 4

Max nTPM: 120.2
Min nTPM: 67.9
RHH5315_R3682 83.6
RHH5223_R3595 120.2
RHH5252_R3624 67.9
RHH5281_R3653 75.4

MONOCYTES - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max TPM 73.0
Schmiedel sample id TPM
Classical monocyte
TPM: 27.7
Samples: 91

Max TPM: 37.2
Min TPM: 21.9
MONOCYTES_1 37.2
MONOCYTES_2 34.7
MONOCYTES_3 34.3
MONOCYTES_4 34.1
MONOCYTES_5 34.1
MONOCYTES_6 33.4
MONOCYTES_7 33.3
MONOCYTES_8 32.7
MONOCYTES_9 32.2
MONOCYTES_10 31.8
MONOCYTES_11 31.6
MONOCYTES_12 31.4
MONOCYTES_13 31.4
MONOCYTES_14 31.1
MONOCYTES_15 30.9
MONOCYTES_16 30.8
MONOCYTES_17 30.3
MONOCYTES_18 30.3
MONOCYTES_19 30.1
MONOCYTES_20 30.0
MONOCYTES_21 30.0
MONOCYTES_22 29.8
MONOCYTES_23 29.8
MONOCYTES_24 29.6
MONOCYTES_25 29.4
MONOCYTES_26 29.2
MONOCYTES_27 29.1
MONOCYTES_28 29.1
MONOCYTES_29 28.9
MONOCYTES_30 28.8
MONOCYTES_31 28.8
MONOCYTES_32 28.7
MONOCYTES_33 28.5
MONOCYTES_34 28.5
MONOCYTES_35 28.3
MONOCYTES_36 28.3
MONOCYTES_37 28.3
MONOCYTES_38 28.1
MONOCYTES_39 28.0
MONOCYTES_40 28.0
MONOCYTES_41 28.0
MONOCYTES_42 27.9
MONOCYTES_43 27.7
MONOCYTES_44 27.7
MONOCYTES_45 27.5
MONOCYTES_46 27.4
MONOCYTES_47 27.4
MONOCYTES_48 27.2
MONOCYTES_49 27.0
MONOCYTES_50 26.8
MONOCYTES_51 26.6
MONOCYTES_52 26.5
MONOCYTES_53 26.5
MONOCYTES_54 26.5
MONOCYTES_55 26.4
MONOCYTES_56 26.4
MONOCYTES_57 26.3
MONOCYTES_58 26.2
MONOCYTES_59 26.0
MONOCYTES_60 26.0
MONOCYTES_61 25.9
MONOCYTES_62 25.5
MONOCYTES_63 25.5
MONOCYTES_64 25.5
MONOCYTES_65 25.4
MONOCYTES_66 25.3
MONOCYTES_67 25.2
MONOCYTES_68 25.2
MONOCYTES_69 25.1
MONOCYTES_70 25.1
MONOCYTES_71 25.0
MONOCYTES_72 24.9
MONOCYTES_73 24.8
MONOCYTES_74 24.8
MONOCYTES_75 24.7
MONOCYTES_76 24.7
MONOCYTES_77 24.7
MONOCYTES_78 24.4
MONOCYTES_79 24.4
MONOCYTES_80 24.3
MONOCYTES_81 24.0
MONOCYTES_82 24.0
MONOCYTES_83 23.9
MONOCYTES_84 23.8
MONOCYTES_85 23.7
MONOCYTES_86 23.5
MONOCYTES_87 23.2
MONOCYTES_88 23.1
MONOCYTES_89 22.9
MONOCYTES_90 22.8
MONOCYTES_91 21.9
Show allShow less
Non-classical monocyte
TPM: 73.0
Samples: 90

Max TPM: 108.8
Min TPM: 52.0
M2_1 108.8
M2_2 104.7
M2_3 101.7
M2_4 100.8
M2_5 100.6
M2_6 96.1
M2_7 95.6
M2_8 94.3
M2_9 92.1
M2_10 91.0
M2_11 89.8
M2_12 88.7
M2_13 87.3
M2_14 86.3
M2_15 86.2
M2_16 85.8
M2_17 85.1
M2_18 82.6
M2_19 82.0
M2_20 82.0
M2_21 81.3
M2_22 81.2
M2_23 80.2
M2_24 80.0
M2_25 79.3
M2_26 79.1
M2_27 77.3
M2_28 77.3
M2_29 76.6
M2_30 75.4
M2_31 75.1
M2_32 74.4
M2_33 74.2
M2_34 73.7
M2_35 73.6
M2_36 73.5
M2_37 72.6
M2_38 72.6
M2_39 72.5
M2_40 72.4
M2_41 72.3
M2_42 72.2
M2_43 71.7
M2_44 71.3
M2_45 70.8
M2_46 70.8
M2_47 70.7
M2_48 70.5
M2_49 70.2
M2_50 69.7
M2_51 69.5
M2_52 69.3
M2_53 69.2
M2_54 68.8
M2_55 68.0
M2_56 67.8
M2_57 67.5
M2_58 67.4
M2_59 67.0
M2_60 66.8
M2_61 65.8
M2_62 65.5
M2_63 65.2
M2_64 64.9
M2_65 64.7
M2_66 63.7
M2_67 63.5
M2_68 63.5
M2_69 63.3
M2_70 63.1
M2_71 62.9
M2_72 62.7
M2_73 62.3
M2_74 62.2
M2_75 61.3
M2_76 61.2
M2_77 60.4
M2_78 60.3
M2_79 60.0
M2_80 59.4
M2_81 58.4
M2_82 57.8
M2_83 56.8
M2_84 56.8
M2_85 56.4
M2_86 54.8
M2_87 54.4
M2_88 54.0
M2_89 53.3
M2_90 52.0
Show allShow less

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org