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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
290.6
nTPM
FANTOM5:
485.0
Scaled Tags Per Million
Pig:
266.4
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
290.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 213.7
2301
Female, age 85, both hemispheres
279.1
2188
Female, age 91, both hemispheres
235.1
2090
Male, age 80, both hemispheres
211.0
1984
Male, age 76, both hemispheres
129.4
Dorsal cochlear nucleus nTPM: 215.2
2187
Female, age 91, both hemispheres
269.0
2370
Male, age 61, both hemispheres
221.6
2802
Male, age 74, right hemisphere
199.2
2378
Male, age 80, both hemispheres
194.6
2058
Male, age 76, both hemispheres
191.7
Dorsal tegmental nucleus nTPM: 214.7
2358
Male, age 61, both hemispheres
236.3
2083
Male, age 80, both hemispheres
225.6
1936
Male, age 76, left hemisphere
201.4
2326
Male, age 74, both hemispheres
195.7
Dorsolateral tegmental area nTPM: 239.3
2337
Male, age 61, both hemispheres
274.5
2751
Female, age 85, both hemispheres
266.1
2141
Male, age 76, both hemispheres
243.9
2654
Male, age 80, both hemispheres
226.8
2360
Male, age 74, both hemispheres
185.2
Kolliker-Fuse nucleus nTPM: 231.9
2793
Female, age 91, left hemisphere
267.3
2315
Male, age 76, right hemisphere
235.3
2163
Male, age 80, both hemispheres
193.2
Lateral lemniscal nuclei nTPM: 279.3
2746
Female, age 85, left hemisphere
327.0
2036
Male, age 80, both hemispheres
310.1
2169
Male, age 76, both hemispheres
277.5
2320
Female, age 91, left hemisphere
243.4
2453
Male, age 74, right hemisphere
238.6
Lateral parabrachial nucleus nTPM: 249.6
2139
Female, age 85, right hemisphere
302.3
2013
Male, age 80, both hemispheres
258.7
2790
Male, age 61, both hemispheres
226.3
2792
Male, age 76, both hemispheres
211.0
Lateral vestibular nucleus nTPM: 212.2
2311
Male, age 80, both hemispheres
244.8
2184
Male, age 76, both hemispheres
179.7
Locus coeruleus nTPM: 244.7
2014
Male, age 55, unknown
255.2
2317
Female, age 72, unknown
252.7
2720
Male, age 74, both hemispheres
249.9
1980
Male, age 76, both hemispheres
248.8
2123
Female, age 91, both hemispheres
243.8
2162
Male, age 80, both hemispheres
240.4
2788
Male, age 74, unknown
222.0
Medial parabrachial nucleus nTPM: 243.0
2170
Female, age 91, both hemispheres
328.8
2854
Male, age 80, both hemispheres
263.7
2786
Male, age 76, both hemispheres
227.0
2156
Male, age 61, both hemispheres
199.2
2463
Female, age 85, right hemisphere
196.3
Medial periolivary nuclei nTPM: 258.7
2171
Female, age 85, both hemispheres
300.0
2063
Male, age 76, both hemispheres
285.7
2791
Male, age 74, right hemisphere
267.2
2081
Male, age 80, both hemispheres
242.3
2458
Female, age 91, both hemispheres
198.2
Motor facial nucleus nTPM: 262.2
2126
Male, age 61, both hemispheres
280.7
2062
Male, age 76, both hemispheres
275.6
2697
Female, age 85, both hemispheres
275.6
2327
Male, age 80, both hemispheres
273.4
2365
Male, age 74, right hemisphere
268.4
2795
Female, age 91, both hemispheres
199.6
Motor trigeminal nucleus nTPM: 243.9
2079
Male, age 80, both hemispheres
268.4
2560
Male, age 74, both hemispheres
256.9
2335
Male, age 61, both hemispheres
240.6
2321
Female, age 91, both hemispheres
233.2
2309
Male, age 76, both hemispheres
220.3
Nuclei of the trapezoid body nTPM: 270.3
2735
Female, age 85, both hemispheres
334.7
2159
Male, age 61, both hemispheres
301.9
1983
Male, age 76, both hemispheres
270.1
2166
Male, age 80, both hemispheres
247.6
2368
Female, age 91, both hemispheres
197.1
Nucleus raphe magnus nTPM: 290.6
2160
Male, age 61, both hemispheres
412.0
2172
Female, age 85, both hemispheres
328.9
2455
Male, age 74, both hemispheres
262.0
2051
Male, age 76, both hemispheres
259.6
2328
Male, age 80, both hemispheres
256.3
2459
Female, age 91, both hemispheres
224.6
Paramedian reticular nucleus nTPM: 230.8
2313
Male, age 61, both hemispheres
253.8
2050
Female, age 85, both hemispheres
239.4
2057
Male, age 80, both hemispheres
223.4
2052
Male, age 76, both hemispheres
206.8
Pedunculopontine tegmental nucleus nTPM: 227.3
2338
Male, age 61, both hemispheres
253.2
1921
Female, age 85, both hemispheres
219.2
2334
Male, age 80, both hemispheres
209.4
Pontine nuclei nTPM: 290.4
2727
Male, age 61, right hemisphere
370.5
2787
Female, age 85, both hemispheres
366.6
2109
Female, age 72, unknown
305.8
1863
Male, age 55, unknown
278.8
2319
Female, age 91, both hemispheres
263.2
2115
Male, age 80, left hemisphere
260.5
1968
Male, age 76, left hemisphere
254.2
2454
Male, age 74, left hemisphere
223.4
Pontine raphe nucleus nTPM: 281.6
2122
Female, age 85, midline
282.6
2853
Male, age 76, midline
280.6
Posteroventral cochlear nucleus nTPM: 214.2
2135
Female, age 91, both hemispheres
226.6
2752
Female, age 85, both hemispheres
218.5
2371
Male, age 61, both hemispheres
211.2
2070
Male, age 76, both hemispheres
210.7
2341
Male, age 80, both hemispheres
203.8
Principal sensory trigeminal nucleus nTPM: 273.8
2158
Male, age 61, both hemispheres
353.5
2008
Male, age 80, left hemisphere
301.0
2367
Female, age 91, left hemisphere
270.4
2324
Male, age 76, both hemispheres
170.5
Reticular pontine nucleus, caudal nTPM: 236.0
2332
Male, age 80, right hemisphere
264.8
2092
Male, age 76, both hemispheres
237.5
2559
Male, age 74, both hemispheres
231.4
2457
Female, age 91, both hemispheres
210.3
Reticular pontine nucleus, oral nTPM: 247.6
2361
Male, age 74, both hemispheres
286.8
2012
Female, age 85, both hemispheres
275.1
2167
Male, age 76, both hemispheres
235.2
1939
Male, age 80, both hemispheres
225.6
2366
Female, age 91, both hemispheres
215.2
Reticulotegmental nucleus nTPM: 214.2
2325
Male, age 76, both hemispheres
248.2
2452
Male, age 74, both hemispheres
213.8
2322
Female, age 91, both hemispheres
204.7
2333
Male, age 80, both hemispheres
190.1
Spinal trigeminal nucleus, oral nTPM: 197.9
1978
Male, age 76, both hemispheres
210.5
2164
Male, age 80, both hemispheres
208.0
2737
Female, age 85, both hemispheres
175.2
Subcoeruleus area nTPM: 242.2
1958
Male, age 80, both hemispheres
266.8
2369
Female, age 85, left hemisphere
263.8
2089
Male, age 76, left hemisphere
258.8
2323
Female, age 91, left hemisphere
218.3
2451
Male, age 74, both hemispheres
203.6
Superior olive nTPM: 266.0
1875
Female, age 85, both hemispheres
333.5
2329
Male, age 80, right hemisphere
258.7
2364
Male, age 74, right hemisphere
256.8
2020
Male, age 76, both hemispheres
255.1
2561
Female, age 91, both hemispheres
225.7
Ventral periolivary nuclei nTPM: 274.3
2130
Female, age 85, both hemispheres
321.7
2023
Male, age 76, both hemispheres
281.4
2165
Male, age 80, both hemispheres
274.3
2794
Female, age 91, left hemisphere
219.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 246.6
2161
Male, age 80, both hemispheres
269.6
1959
Male, age 76, both hemispheres
256.0
2840
Female, age 85, both hemispheres
254.9
2449
Male, age 74, both hemispheres
253.4
2359
Male, age 61, both hemispheres
247.4
2456
Female, age 91, both hemispheres
198.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
