HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:6.7 nTPM
HPA Brain:36.0 nTPM
GTEx:6.7 nTPM
FANTOM5:79.2 Scaled Tags Per Million
Pig:50.3 nTPM
Mouse:24.8 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015234
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.0
Sample id Sample description nTPM
Hippocampus
nTPM: 36.0
1911 Female, age 85, right hemisphere 40.8
2148 Female, age 91, left hemisphere 39.8
2529 Female, age 94, left hemisphere 37.2
1855 Male, age 76, left hemisphere 35.2
2621 Female, age 67, right hemisphere 31.8
1898 Male, age 80, left hemisphere 30.9
Dentate gyrus
nTPM: 28.7
2528 Male, age 74, both hemispheres 32.9
1927 Female, age 91, both hemispheres 32.6
2246 Female, age 85, both hemispheres 29.2
2010 Male, age 76, both hemispheres 27.4
2530 Female, age 94, left hemisphere 26.0
2531 Female, age 67, both hemispheres 24.1
Entorhinal gyrus
nTPM: 23.9
2117 Female, age 91, right hemisphere 33.3
1938 Female, age 85, left hemisphere 32.4
2686 Male, age 75, right hemisphere 21.7
1787 Male, age 76, left hemisphere 21.6
2764 Male, age 80, right hemisphere 17.3
2613 Female, age 94, left hemisphere 17.2
Hippocampus, CA1
nTPM: 31.8
2527 Male, age 74, both hemispheres 38.0
1873 Female, age 85, both hemispheres 34.7
2082 Female, age 91, right hemisphere 32.0
2045 Male, age 76, both hemispheres 27.5
2749 Male, age 80, left hemisphere 26.6
Hippocampus, CA2
nTPM: 30.0
2113 Female, age 91, right hemisphere 36.3
1940 Female, age 85, left hemisphere 33.5
2249 Male, age 74, both hemispheres 32.6
1963 Male, age 80, left hemisphere 29.5
2437 Female, age 94, left hemisphere 26.0
1892 Male, age 76, both hemispheres 21.9
Hippocampus, CA3
nTPM: 28.6
2861 Female, age 67, both hemispheres 34.3
1891 Female, age 85, both hemispheres 33.4
1867 Male, age 76, both hemispheres 28.5
2436 Male, age 74, both hemispheres 27.8
2137 Male, age 80, left hemisphere 25.9
2620 Female, age 94, left hemisphere 21.9
Parahippocampal cortex
nTPM: 27.2
2692 Male, age 74, both hemispheres 36.9
1933 Female, age 85, both hemispheres 30.9
2622 Female, age 67, right hemisphere 29.9
2250 Female, age 67, right hemisphere 28.7
2245 Female, age 91, both hemispheres 27.9
1990 Female, age 91, right hemisphere 26.8
2018 Male, age 76, both hemispheres 24.0
1850 Male, age 80, both hemispheres 23.2
2693 Female, age 94, both hemispheres 22.5
2532 Female, age 72, left hemisphere 21.0
Perirhinal gyrus
nTPM: 21.7
1841 Female, age 85, right hemisphere 24.7
1847 Female, age 91, left hemisphere 24.0
2521 Female, age 94, right hemisphere 22.7
1794 Male, age 80, right hemisphere 21.6
2848 Male, age 76, right hemisphere 15.7
Subiculum
nTPM: 30.3
2729 Female, age 91, right hemisphere 42.2
2619 Male, age 74, both hemispheres 35.2
2438 Female, age 94, left hemisphere 29.4
2042 Male, age 76, both hemispheres 26.5
1901 Male, age 80, both hemispheres 25.0
1977 Female, age 85, both hemispheres 23.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 6.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.7
Samples: 197

Max nTPM: 16.2
Min nTPM: 2.0
Std nTPM: 2.3
Median nTPM: 6.5
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 16.2
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 13.0
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 13.0
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 13.0
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 12.9
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 12.8
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 11.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 11.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 11.1
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 11.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 10.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 79.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 79.2
FF:10153-102I9 76 years, female 84.7
FF:10169-103B7 60 years, female 73.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 50.3
Pig sample Sample description nTPM
Subiculum
nTPM: 44.8
Samples: 4

Max nTPM: 50.4
Min nTPM: 33.7
Sample A Female 50.4
Sample B Female 46.2
Sample C Male 33.7
Sample D Male 48.8
Dorsal hippocampus
nTPM: 46.6
Samples: 4

Max nTPM: 60.4
Min nTPM: 40.3
Sample A Female 40.3
Sample B Female 42.3
Sample C Male 43.2
Sample D Male 60.4
Entorhinal cortex
nTPM: 50.4
Samples: 4

Max nTPM: 54.5
Min nTPM: 48.5
Sample A Female 49.3
Sample B Female 54.5
Sample C Male 48.5
Sample D Male 49.1
Ventral hippocampus
nTPM: 39.5
Samples: 4

Max nTPM: 46.4
Min nTPM: 32.9
Sample A Female 32.9
Sample B Female 46.4
Sample C Male 34.0
Sample D Male 44.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.8
Samples: 4

Max nTPM: 27.0
Min nTPM: 21.2
Sample A Male 26.8
Sample B Male 21.2
Sample C Female 27.0
Sample D Female 24.3
Hippocampal formation
nTPM: 18.8
Samples: 4

Max nTPM: 21.2
Min nTPM: 16.5
Sample A Male 20.8
Sample B Male 16.5
Sample C Female 16.5
Sample D Female 21.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69626843 Antisense, RP_050428_01_D02, Mouse strain C57BL/6J (56 days, male) 0.3
100144925 Antisense, RP_110519_01_E11, Mouse strain C57BL/6J (56 days, male) 0.2
71580192 Antisense, RP_050915_04_D06, Mouse strain C57BL/6J (56 days, male) 0.0

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