HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Neuronal projections: Not detected
Synapses: Medium
RNA expressioni
Consensus:89.7 nTPM
HPA Brain:296.3 nTPM
GTEx:89.7 nTPM
FANTOM5:141.1 Scaled Tags Per Million
Pig:86.6 nTPM
Mouse:232.7 nTPM
Allen mouse:20.9 Expression energy

HIPPOCAMPUS - Extended tissue profilei , antibody HPA007179
Glial cells Not detected
Neuronal cells Medium
Neuronal projections Not detected
Synapses Medium

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007179
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 296.3
Sample id Sample description nTPM
Hippocampus
nTPM: 220.9
1855 Male, age 76, left hemisphere 327.1
1898 Male, age 80, left hemisphere 264.0
2621 Female, age 67, right hemisphere 257.2
2148 Female, age 91, left hemisphere 199.0
2529 Female, age 94, left hemisphere 146.2
1911 Female, age 85, right hemisphere 131.9
Dentate gyrus
nTPM: 236.7
2530 Female, age 94, left hemisphere 329.1
1927 Female, age 91, both hemispheres 267.8
2531 Female, age 67, both hemispheres 233.0
2010 Male, age 76, both hemispheres 222.1
2246 Female, age 85, both hemispheres 203.7
2528 Male, age 74, both hemispheres 164.6
Entorhinal gyrus
nTPM: 210.5
2613 Female, age 94, left hemisphere 311.4
1787 Male, age 76, left hemisphere 213.4
2764 Male, age 80, right hemisphere 209.6
1938 Female, age 85, left hemisphere 205.0
2686 Male, age 75, right hemisphere 196.4
2117 Female, age 91, right hemisphere 127.2
Hippocampus, CA1
nTPM: 249.3
2749 Male, age 80, left hemisphere 380.4
2045 Male, age 76, both hemispheres 280.6
1873 Female, age 85, both hemispheres 216.5
2082 Female, age 91, right hemisphere 211.0
2527 Male, age 74, both hemispheres 157.9
Hippocampus, CA2
nTPM: 200.4
2437 Female, age 94, left hemisphere 275.1
1963 Male, age 80, left hemisphere 255.3
1892 Male, age 76, both hemispheres 239.8
1940 Female, age 85, left hemisphere 164.1
2113 Female, age 91, right hemisphere 161.0
2249 Male, age 74, both hemispheres 106.8
Hippocampus, CA3
nTPM: 226.1
2137 Male, age 80, left hemisphere 313.1
2861 Female, age 67, both hemispheres 295.4
2620 Female, age 94, left hemisphere 282.7
1867 Male, age 76, both hemispheres 197.6
2436 Male, age 74, both hemispheres 142.1
1891 Female, age 85, both hemispheres 125.8
Parahippocampal cortex
nTPM: 218.0
2245 Female, age 91, both hemispheres 297.3
2693 Female, age 94, both hemispheres 249.4
2250 Female, age 67, right hemisphere 231.5
1850 Male, age 80, both hemispheres 226.6
2622 Female, age 67, right hemisphere 216.4
1933 Female, age 85, both hemispheres 216.1
1990 Female, age 91, right hemisphere 207.9
2018 Male, age 76, both hemispheres 201.3
2532 Female, age 72, left hemisphere 191.8
2692 Male, age 74, both hemispheres 141.7
Perirhinal gyrus
nTPM: 296.3
1847 Female, age 91, left hemisphere 403.6
2521 Female, age 94, right hemisphere 363.3
1794 Male, age 80, right hemisphere 279.7
1841 Female, age 85, right hemisphere 218.1
2848 Male, age 76, right hemisphere 217.0
Subiculum
nTPM: 163.0
1977 Female, age 85, both hemispheres 190.8
2438 Female, age 94, left hemisphere 173.1
1901 Male, age 80, both hemispheres 170.1
2042 Male, age 76, both hemispheres 153.8
2729 Female, age 91, right hemisphere 149.2
2619 Male, age 74, both hemispheres 141.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 89.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 89.7
Samples: 197

Max nTPM: 252.0
Min nTPM: 0.6
Std nTPM: 53.3
Median nTPM: 89.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 252.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 230.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 226.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 223.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 221.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 214.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 203.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 201.2
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 199.2
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 195.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 183.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 141.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 141.1
FF:10169-103B7 60 years, female 206.6
FF:10153-102I9 76 years, female 75.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 86.6
Pig sample Sample description nTPM
Subiculum
nTPM: 86.6
Samples: 4

Max nTPM: 109.3
Min nTPM: 72.1
Sample A Female 109.3
Sample B Female 75.6
Sample C Male 89.4
Sample D Male 72.1
Dorsal hippocampus
nTPM: 69.2
Samples: 4

Max nTPM: 88.1
Min nTPM: 44.9
Sample A Female 88.1
Sample B Female 76.0
Sample C Male 67.7
Sample D Male 44.9
Entorhinal cortex
nTPM: 82.0
Samples: 4

Max nTPM: 94.4
Min nTPM: 68.5
Sample A Female 84.6
Sample B Female 68.5
Sample C Male 94.4
Sample D Male 80.5
Ventral hippocampus
nTPM: 76.0
Samples: 4

Max nTPM: 103.0
Min nTPM: 51.8
Sample A Female 75.7
Sample B Female 51.8
Sample C Male 103.0
Sample D Male 73.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 232.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 232.7
Samples: 4

Max nTPM: 254.6
Min nTPM: 204.2
Sample A Male 224.6
Sample B Male 247.5
Sample C Female 204.2
Sample D Female 254.6
Hippocampal formation
nTPM: 224.2
Samples: 4

Max nTPM: 252.2
Min nTPM: 209.1
Sample A Male 209.1
Sample B Male 252.2
Sample C Female 218.4
Sample D Female 217.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.9
71381133 Antisense, RP_050510_03_F10, Mouse strain C57BL/6J (56 days, male) 20.9

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