HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:7.5 nTPM
HPA Brain:48.5 nTPM
GTEx:7.5 nTPM
FANTOM5:32.2 Scaled Tags Per Million
Pig:45.3 nTPM
Mouse:12.9 nTPM
Allen mouse:4.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042863
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 48.5
Sample id Sample description nTPM
Hippocampus
nTPM: 41.0
2148 Female, age 91, left hemisphere 43.5
1898 Male, age 80, left hemisphere 41.7
2529 Female, age 94, left hemisphere 40.9
2621 Female, age 67, right hemisphere 40.5
1855 Male, age 76, left hemisphere 40.2
1911 Female, age 85, right hemisphere 39.4
Dentate gyrus
nTPM: 41.6
1927 Female, age 91, both hemispheres 47.4
2246 Female, age 85, both hemispheres 43.6
2010 Male, age 76, both hemispheres 41.8
2531 Female, age 67, both hemispheres 39.4
2528 Male, age 74, both hemispheres 39.1
2530 Female, age 94, left hemisphere 38.2
Entorhinal gyrus
nTPM: 42.5
2764 Male, age 80, right hemisphere 44.9
1938 Female, age 85, left hemisphere 44.7
1787 Male, age 76, left hemisphere 43.6
2117 Female, age 91, right hemisphere 41.8
2613 Female, age 94, left hemisphere 41.6
2686 Male, age 75, right hemisphere 38.5
Hippocampus, CA1
nTPM: 44.5
2749 Male, age 80, left hemisphere 57.0
1873 Female, age 85, both hemispheres 43.1
2045 Male, age 76, both hemispheres 42.5
2527 Male, age 74, both hemispheres 41.1
2082 Female, age 91, right hemisphere 38.8
Hippocampus, CA2
nTPM: 41.9
1963 Male, age 80, left hemisphere 49.5
1892 Male, age 76, both hemispheres 44.8
2437 Female, age 94, left hemisphere 41.6
2113 Female, age 91, right hemisphere 41.4
2249 Male, age 74, both hemispheres 38.0
1940 Female, age 85, left hemisphere 36.5
Hippocampus, CA3
nTPM: 42.3
2137 Male, age 80, left hemisphere 54.4
1867 Male, age 76, both hemispheres 42.7
1891 Female, age 85, both hemispheres 40.8
2436 Male, age 74, both hemispheres 40.0
2861 Female, age 67, both hemispheres 39.2
2620 Female, age 94, left hemisphere 36.9
Parahippocampal cortex
nTPM: 42.2
1850 Male, age 80, both hemispheres 50.2
1990 Female, age 91, right hemisphere 45.8
1933 Female, age 85, both hemispheres 45.0
2245 Female, age 91, both hemispheres 43.9
2532 Female, age 72, left hemisphere 43.1
2250 Female, age 67, right hemisphere 40.6
2018 Male, age 76, both hemispheres 39.9
2693 Female, age 94, both hemispheres 39.7
2622 Female, age 67, right hemisphere 38.0
2692 Male, age 74, both hemispheres 36.0
Perirhinal gyrus
nTPM: 48.5
1847 Female, age 91, left hemisphere 55.6
1794 Male, age 80, right hemisphere 50.1
1841 Female, age 85, right hemisphere 46.6
2848 Male, age 76, right hemisphere 45.8
2521 Female, age 94, right hemisphere 44.2
Subiculum
nTPM: 41.4
1901 Male, age 80, both hemispheres 44.6
1977 Female, age 85, both hemispheres 44.1
2619 Male, age 74, both hemispheres 41.1
2729 Female, age 91, right hemisphere 40.9
2042 Male, age 76, both hemispheres 39.0
2438 Female, age 94, left hemisphere 38.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 7.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.5
Samples: 197

Max nTPM: 13.1
Min nTPM: 5.2
Std nTPM: 1.1
Median nTPM: 7.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 13.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 11.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 10.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 10.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 10.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 10.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 9.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 9.7
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 9.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 9.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 9.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.2
FF:10169-103B7 60 years, female 38.4
FF:10153-102I9 76 years, female 25.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.3
Pig sample Sample description nTPM
Subiculum
nTPM: 41.4
Samples: 4

Max nTPM: 48.2
Min nTPM: 38.7
Sample A Female 48.2
Sample B Female 39.9
Sample C Male 38.7
Sample D Male 38.7
Dorsal hippocampus
nTPM: 45.3
Samples: 4

Max nTPM: 48.2
Min nTPM: 41.5
Sample A Female 48.1
Sample B Female 48.2
Sample C Male 43.5
Sample D Male 41.5
Entorhinal cortex
nTPM: 43.1
Samples: 4

Max nTPM: 46.0
Min nTPM: 37.7
Sample A Female 46.0
Sample B Female 45.6
Sample C Male 43.0
Sample D Male 37.7
Ventral hippocampus
nTPM: 38.8
Samples: 4

Max nTPM: 42.5
Min nTPM: 34.9
Sample A Female 41.8
Sample B Female 36.0
Sample C Male 34.9
Sample D Male 42.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.9
Samples: 4

Max nTPM: 14.7
Min nTPM: 11.4
Sample A Male 12.9
Sample B Male 12.5
Sample C Female 11.4
Sample D Female 14.7
Hippocampal formation
nTPM: 12.5
Samples: 4

Max nTPM: 14.8
Min nTPM: 9.7
Sample A Male 10.9
Sample B Male 14.4
Sample C Female 14.8
Sample D Female 9.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.0
70946614 Antisense, RP_050505_01_E12, Mouse strain C57BL/6J (56 days, male) 4.0

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