HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:51.0 nTPM
HPA Brain:78.4 nTPM
GTEx:51.0 nTPM
FANTOM5:159.6 Scaled Tags Per Million
Pig:173.5 nTPM
Mouse:246.2 nTPM
Allen mouse:5.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049290Antibody HPA057668
Glial cells LowMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 78.4
Sample id Sample description nTPM
Hippocampus
nTPM: 71.9
1898 Male, age 80, left hemisphere 86.6
2529 Female, age 94, left hemisphere 76.2
2621 Female, age 67, right hemisphere 72.0
1855 Male, age 76, left hemisphere 70.7
1911 Female, age 85, right hemisphere 68.0
2148 Female, age 91, left hemisphere 57.9
Dentate gyrus
nTPM: 68.4
2010 Male, age 76, both hemispheres 76.6
2528 Male, age 74, both hemispheres 75.0
2246 Female, age 85, both hemispheres 69.9
2530 Female, age 94, left hemisphere 68.1
1927 Female, age 91, both hemispheres 67.2
2531 Female, age 67, both hemispheres 53.7
Entorhinal gyrus
nTPM: 70.6
1938 Female, age 85, left hemisphere 83.5
2117 Female, age 91, right hemisphere 82.0
2764 Male, age 80, right hemisphere 72.0
1787 Male, age 76, left hemisphere 70.1
2686 Male, age 75, right hemisphere 61.9
2613 Female, age 94, left hemisphere 54.1
Hippocampus, CA1
nTPM: 71.1
2527 Male, age 74, both hemispheres 79.1
2749 Male, age 80, left hemisphere 76.3
1873 Female, age 85, both hemispheres 76.1
2082 Female, age 91, right hemisphere 62.6
2045 Male, age 76, both hemispheres 61.6
Hippocampus, CA2
nTPM: 76.1
1892 Male, age 76, both hemispheres 89.1
2249 Male, age 74, both hemispheres 83.3
1963 Male, age 80, left hemisphere 74.8
1940 Female, age 85, left hemisphere 74.7
2113 Female, age 91, right hemisphere 67.5
2437 Female, age 94, left hemisphere 67.4
Hippocampus, CA3
nTPM: 63.6
1867 Male, age 76, both hemispheres 80.6
2436 Male, age 74, both hemispheres 77.3
1891 Female, age 85, both hemispheres 76.8
2137 Male, age 80, left hemisphere 59.8
2861 Female, age 67, both hemispheres 45.2
2620 Female, age 94, left hemisphere 42.1
Parahippocampal cortex
nTPM: 71.6
1850 Male, age 80, both hemispheres 86.2
1990 Female, age 91, right hemisphere 78.4
2250 Female, age 67, right hemisphere 77.4
2532 Female, age 72, left hemisphere 75.2
1933 Female, age 85, both hemispheres 74.8
2018 Male, age 76, both hemispheres 72.1
2693 Female, age 94, both hemispheres 69.3
2245 Female, age 91, both hemispheres 65.3
2692 Male, age 74, both hemispheres 64.6
2622 Female, age 67, right hemisphere 52.5
Perirhinal gyrus
nTPM: 78.4
1841 Female, age 85, right hemisphere 84.8
1847 Female, age 91, left hemisphere 81.1
1794 Male, age 80, right hemisphere 78.5
2848 Male, age 76, right hemisphere 73.8
2521 Female, age 94, right hemisphere 73.7
Subiculum
nTPM: 76.0
2438 Female, age 94, left hemisphere 83.3
2042 Male, age 76, both hemispheres 80.1
1977 Female, age 85, both hemispheres 77.4
1901 Male, age 80, both hemispheres 75.5
2619 Male, age 74, both hemispheres 73.7
2729 Female, age 91, right hemisphere 66.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 51.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 51.0
Samples: 197

Max nTPM: 87.3
Min nTPM: 28.5
Std nTPM: 9.4
Median nTPM: 49.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 87.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 85.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 72.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 69.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 69.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 69.0
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 68.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 68.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 68.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 68.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 67.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 159.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 159.6
FF:10169-103B7 60 years, female 175.5
FF:10153-102I9 76 years, female 143.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 173.5
Pig sample Sample description nTPM
Subiculum
nTPM: 154.0
Samples: 4

Max nTPM: 197.7
Min nTPM: 136.6
Sample A Female 197.7
Sample B Female 143.6
Sample C Male 136.6
Sample D Male 138.1
Dorsal hippocampus
nTPM: 173.5
Samples: 4

Max nTPM: 220.5
Min nTPM: 136.0
Sample A Female 220.5
Sample B Female 174.1
Sample C Male 163.4
Sample D Male 136.0
Entorhinal cortex
nTPM: 149.7
Samples: 4

Max nTPM: 173.7
Min nTPM: 126.8
Sample A Female 173.7
Sample B Female 154.9
Sample C Male 143.4
Sample D Male 126.8
Ventral hippocampus
nTPM: 160.8
Samples: 4

Max nTPM: 187.9
Min nTPM: 110.0
Sample A Female 167.7
Sample B Female 110.0
Sample C Male 187.9
Sample D Male 177.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 246.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 246.2
Samples: 4

Max nTPM: 264.7
Min nTPM: 237.0
Sample A Male 237.4
Sample B Male 237.0
Sample C Female 245.5
Sample D Female 264.7
Hippocampal formation
nTPM: 242.4
Samples: 4

Max nTPM: 257.5
Min nTPM: 230.3
Sample A Male 257.5
Sample B Male 232.9
Sample C Female 249.0
Sample D Female 230.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.7
491 Antisense, RP_Baylor_102814, Mouse strain C57BL/6J (56 days, male) 5.7
492 Antisense, RP_Baylor_102814, Mouse strain C57BL/6J (56 days, male) 4.9

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