HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:107.3 nTPM
HPA Brain:114.7 nTPM
GTEx:107.3 nTPM
FANTOM5:121.1 Scaled Tags Per Million
Pig:111.7 nTPM
Mouse:82.8 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016936
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 114.7
Sample id Sample description nTPM
Hippocampus
nTPM: 83.6
1898 Male, age 80, left hemisphere 115.9
1855 Male, age 76, left hemisphere 97.3
2621 Female, age 67, right hemisphere 82.6
2148 Female, age 91, left hemisphere 71.5
2529 Female, age 94, left hemisphere 67.8
1911 Female, age 85, right hemisphere 66.8
Dentate gyrus
nTPM: 87.5
2010 Male, age 76, both hemispheres 106.0
1927 Female, age 91, both hemispheres 99.9
2530 Female, age 94, left hemisphere 87.7
2528 Male, age 74, both hemispheres 81.9
2246 Female, age 85, both hemispheres 80.4
2531 Female, age 67, both hemispheres 69.3
Entorhinal gyrus
nTPM: 84.1
2764 Male, age 80, right hemisphere 107.0
1938 Female, age 85, left hemisphere 94.6
1787 Male, age 76, left hemisphere 84.9
2613 Female, age 94, left hemisphere 81.1
2117 Female, age 91, right hemisphere 69.3
2686 Male, age 75, right hemisphere 67.6
Hippocampus, CA1
nTPM: 96.4
2749 Male, age 80, left hemisphere 137.0
2045 Male, age 76, both hemispheres 101.7
1873 Female, age 85, both hemispheres 98.2
2527 Male, age 74, both hemispheres 73.3
2082 Female, age 91, right hemisphere 71.9
Hippocampus, CA2
nTPM: 88.9
1892 Male, age 76, both hemispheres 117.0
1963 Male, age 80, left hemisphere 105.7
2249 Male, age 74, both hemispheres 87.3
1940 Female, age 85, left hemisphere 81.5
2113 Female, age 91, right hemisphere 71.5
2437 Female, age 94, left hemisphere 70.2
Hippocampus, CA3
nTPM: 83.8
1867 Male, age 76, both hemispheres 104.0
2137 Male, age 80, left hemisphere 103.5
2620 Female, age 94, left hemisphere 81.9
2436 Male, age 74, both hemispheres 76.4
1891 Female, age 85, both hemispheres 74.4
2861 Female, age 67, both hemispheres 62.8
Parahippocampal cortex
nTPM: 89.0
1850 Male, age 80, both hemispheres 121.3
1933 Female, age 85, both hemispheres 99.5
2245 Female, age 91, both hemispheres 98.6
2693 Female, age 94, both hemispheres 90.3
1990 Female, age 91, right hemisphere 89.8
2018 Male, age 76, both hemispheres 87.7
2250 Female, age 67, right hemisphere 87.3
2532 Female, age 72, left hemisphere 87.2
2692 Male, age 74, both hemispheres 66.4
2622 Female, age 67, right hemisphere 62.1
Perirhinal gyrus
nTPM: 114.7
1794 Male, age 80, right hemisphere 131.7
1847 Female, age 91, left hemisphere 122.3
1841 Female, age 85, right hemisphere 108.9
2521 Female, age 94, right hemisphere 107.9
2848 Male, age 76, right hemisphere 102.9
Subiculum
nTPM: 77.5
1977 Female, age 85, both hemispheres 91.3
1901 Male, age 80, both hemispheres 84.7
2042 Male, age 76, both hemispheres 84.6
2729 Female, age 91, right hemisphere 69.4
2619 Male, age 74, both hemispheres 68.6
2438 Female, age 94, left hemisphere 66.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 107.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 107.3
Samples: 197

Max nTPM: 252.2
Min nTPM: 48.2
Std nTPM: 34.0
Median nTPM: 101.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 252.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 239.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 191.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 187.3
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 185.5
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 179.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 173.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 171.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 170.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 168.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 167.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 121.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 121.1
FF:10169-103B7 60 years, female 169.2
FF:10153-102I9 76 years, female 73.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 111.7
Pig sample Sample description nTPM
Subiculum
nTPM: 103.5
Samples: 4

Max nTPM: 135.6
Min nTPM: 90.8
Sample A Female 135.6
Sample B Female 95.3
Sample C Male 92.1
Sample D Male 90.8
Dorsal hippocampus
nTPM: 111.7
Samples: 4

Max nTPM: 139.1
Min nTPM: 86.9
Sample A Female 139.1
Sample B Female 119.6
Sample C Male 101.0
Sample D Male 86.9
Entorhinal cortex
nTPM: 102.0
Samples: 4

Max nTPM: 112.3
Min nTPM: 79.5
Sample A Female 109.3
Sample B Female 112.3
Sample C Male 106.8
Sample D Male 79.5
Ventral hippocampus
nTPM: 104.9
Samples: 4

Max nTPM: 117.7
Min nTPM: 79.7
Sample A Female 117.7
Sample B Female 79.7
Sample C Male 116.7
Sample D Male 105.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 82.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 82.8
Samples: 4

Max nTPM: 86.9
Min nTPM: 79.8
Sample A Male 83.8
Sample B Male 86.9
Sample C Female 80.8
Sample D Female 79.8
Hippocampal formation
nTPM: 82.4
Samples: 4

Max nTPM: 89.5
Min nTPM: 77.1
Sample A Male 89.5
Sample B Male 80.3
Sample C Female 82.6
Sample D Female 77.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
71232582 Antisense, RP_050412_01_E11, Mouse strain C57BL/6J (56 days, male) 1.7

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