HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:460.4 nTPM
HPA Brain:491.4 nTPM
GTEx:460.4 nTPM
FANTOM5:283.5 Scaled Tags Per Million
Pig:148.7 nTPM
Mouse:152.1 nTPM
Allen mouse:13.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA059237
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 491.4
Sample id Sample description nTPM
Hippocampus
nTPM: 487.9
2621 Female, age 67, right hemisphere 632.7
2148 Female, age 91, left hemisphere 498.7
2529 Female, age 94, left hemisphere 469.5
1911 Female, age 85, right hemisphere 461.7
1898 Male, age 80, left hemisphere 452.7
1855 Male, age 76, left hemisphere 411.9
Dentate gyrus
nTPM: 469.3
2531 Female, age 67, both hemispheres 641.9
1927 Female, age 91, both hemispheres 539.0
2530 Female, age 94, left hemisphere 519.1
2528 Male, age 74, both hemispheres 424.1
2010 Male, age 76, both hemispheres 373.0
2246 Female, age 85, both hemispheres 318.3
Entorhinal gyrus
nTPM: 310.7
2613 Female, age 94, left hemisphere 427.2
2764 Male, age 80, right hemisphere 307.8
1787 Male, age 76, left hemisphere 298.1
2686 Male, age 75, right hemisphere 292.8
1938 Female, age 85, left hemisphere 280.9
2117 Female, age 91, right hemisphere 257.1
Hippocampus, CA1
nTPM: 470.5
2749 Male, age 80, left hemisphere 687.6
2527 Male, age 74, both hemispheres 571.5
1873 Female, age 85, both hemispheres 388.7
2045 Male, age 76, both hemispheres 365.0
2082 Female, age 91, right hemisphere 339.5
Hippocampus, CA2
nTPM: 421.8
1963 Male, age 80, left hemisphere 648.9
2113 Female, age 91, right hemisphere 439.1
2249 Male, age 74, both hemispheres 405.1
2437 Female, age 94, left hemisphere 386.1
1892 Male, age 76, both hemispheres 381.8
1940 Female, age 85, left hemisphere 269.7
Hippocampus, CA3
nTPM: 491.4
2861 Female, age 67, both hemispheres 753.1
2137 Male, age 80, left hemisphere 631.1
2620 Female, age 94, left hemisphere 571.6
1867 Male, age 76, both hemispheres 362.6
2436 Male, age 74, both hemispheres 361.6
1891 Female, age 85, both hemispheres 268.4
Parahippocampal cortex
nTPM: 324.5
2245 Female, age 91, both hemispheres 540.6
2250 Female, age 67, right hemisphere 370.2
2622 Female, age 67, right hemisphere 358.5
2018 Male, age 76, both hemispheres 357.6
1933 Female, age 85, both hemispheres 297.5
2693 Female, age 94, both hemispheres 284.8
1990 Female, age 91, right hemisphere 280.1
2532 Female, age 72, left hemisphere 254.1
2692 Male, age 74, both hemispheres 253.1
1850 Male, age 80, both hemispheres 248.9
Perirhinal gyrus
nTPM: 328.3
1847 Female, age 91, left hemisphere 394.9
2521 Female, age 94, right hemisphere 387.3
1794 Male, age 80, right hemisphere 319.0
1841 Female, age 85, right hemisphere 292.6
2848 Male, age 76, right hemisphere 247.6
Subiculum
nTPM: 283.1
2729 Female, age 91, right hemisphere 349.8
1901 Male, age 80, both hemispheres 308.3
2042 Male, age 76, both hemispheres 302.7
1977 Female, age 85, both hemispheres 277.0
2619 Male, age 74, both hemispheres 272.2
2438 Female, age 94, left hemisphere 188.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 460.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 460.4
Samples: 197

Max nTPM: 1433.3
Min nTPM: 15.1
Std nTPM: 280.8
Median nTPM: 422.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1433.3
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 1345.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 1344.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 1212.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 1210.6
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 1188.1
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 1182.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 1173.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 1107.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 1013.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 977.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 283.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 283.5
FF:10169-103B7 60 years, female 314.6
FF:10153-102I9 76 years, female 252.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 148.7
Pig sample Sample description nTPM
Subiculum
nTPM: 104.6
Samples: 4

Max nTPM: 149.3
Min nTPM: 78.1
Sample A Female 149.3
Sample B Female 95.9
Sample C Male 94.9
Sample D Male 78.1
Dorsal hippocampus
nTPM: 148.7
Samples: 4

Max nTPM: 178.6
Min nTPM: 110.7
Sample A Female 178.6
Sample B Female 171.6
Sample C Male 110.7
Sample D Male 133.7
Entorhinal cortex
nTPM: 140.3
Samples: 4

Max nTPM: 177.4
Min nTPM: 118.7
Sample A Female 139.6
Sample B Female 125.4
Sample C Male 177.4
Sample D Male 118.7
Ventral hippocampus
nTPM: 125.2
Samples: 4

Max nTPM: 186.2
Min nTPM: 84.3
Sample A Female 84.3
Sample B Female 100.2
Sample C Male 130.1
Sample D Male 186.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 152.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 137.5
Samples: 4

Max nTPM: 162.2
Min nTPM: 109.2
Sample A Male 145.0
Sample B Male 162.2
Sample C Female 133.7
Sample D Female 109.2
Hippocampal formation
nTPM: 152.1
Samples: 4

Max nTPM: 165.4
Min nTPM: 139.8
Sample A Male 139.8
Sample B Male 165.4
Sample C Female 143.6
Sample D Female 159.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.2
72128746 Antisense, RP_051017_04_C02, Mouse strain C57BL/6J (56 days, male) 14.6
69352896 Antisense, RP_050412_01_D02, Mouse strain C57BL/6J (56 days, male) 11.8

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