HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:91.5 nTPM
HPA Brain:58.0 nTPM
GTEx:91.5 nTPM
FANTOM5:46.3 Scaled Tags Per Million
Pig:15.5 nTPM
Mouse:2.8 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA073947
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 58.0
Sample id Sample description nTPM
Hippocampus
nTPM: 50.4
1898 Male, age 80, left hemisphere 65.4
2148 Female, age 91, left hemisphere 51.0
2529 Female, age 94, left hemisphere 50.7
2621 Female, age 67, right hemisphere 46.6
1911 Female, age 85, right hemisphere 44.5
1855 Male, age 76, left hemisphere 44.2
Dentate gyrus
nTPM: 47.8
1927 Female, age 91, both hemispheres 54.2
2010 Male, age 76, both hemispheres 52.3
2528 Male, age 74, both hemispheres 49.5
2530 Female, age 94, left hemisphere 46.9
2246 Female, age 85, both hemispheres 44.6
2531 Female, age 67, both hemispheres 39.4
Entorhinal gyrus
nTPM: 46.3
1787 Male, age 76, left hemisphere 52.4
1938 Female, age 85, left hemisphere 52.1
2764 Male, age 80, right hemisphere 51.7
2686 Male, age 75, right hemisphere 42.5
2117 Female, age 91, right hemisphere 41.5
2613 Female, age 94, left hemisphere 37.9
Hippocampus, CA1
nTPM: 53.5
2749 Male, age 80, left hemisphere 75.7
2527 Male, age 74, both hemispheres 52.9
1873 Female, age 85, both hemispheres 46.7
2082 Female, age 91, right hemisphere 46.7
2045 Male, age 76, both hemispheres 45.5
Hippocampus, CA2
nTPM: 52.3
1963 Male, age 80, left hemisphere 59.5
2249 Male, age 74, both hemispheres 58.4
1892 Male, age 76, both hemispheres 57.9
2437 Female, age 94, left hemisphere 50.0
1940 Female, age 85, left hemisphere 46.0
2113 Female, age 91, right hemisphere 42.0
Hippocampus, CA3
nTPM: 53.5
2436 Male, age 74, both hemispheres 62.0
2137 Male, age 80, left hemisphere 55.2
1867 Male, age 76, both hemispheres 54.9
2861 Female, age 67, both hemispheres 54.1
2620 Female, age 94, left hemisphere 48.4
1891 Female, age 85, both hemispheres 46.7
Parahippocampal cortex
nTPM: 47.8
1850 Male, age 80, both hemispheres 54.5
2250 Female, age 67, right hemisphere 53.0
2018 Male, age 76, both hemispheres 51.1
1933 Female, age 85, both hemispheres 49.8
2245 Female, age 91, both hemispheres 49.6
2532 Female, age 72, left hemisphere 49.4
1990 Female, age 91, right hemisphere 47.7
2622 Female, age 67, right hemisphere 43.2
2693 Female, age 94, both hemispheres 42.2
2692 Male, age 74, both hemispheres 37.2
Perirhinal gyrus
nTPM: 58.0
1847 Female, age 91, left hemisphere 69.9
1794 Male, age 80, right hemisphere 66.0
1841 Female, age 85, right hemisphere 56.1
2521 Female, age 94, right hemisphere 49.4
2848 Male, age 76, right hemisphere 48.8
Subiculum
nTPM: 48.6
1977 Female, age 85, both hemispheres 54.0
2619 Male, age 74, both hemispheres 52.4
2438 Female, age 94, left hemisphere 50.0
1901 Male, age 80, both hemispheres 48.2
2042 Male, age 76, both hemispheres 43.5
2729 Female, age 91, right hemisphere 43.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 91.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 91.5
Samples: 197

Max nTPM: 237.0
Min nTPM: 50.7
Std nTPM: 26.8
Median nTPM: 86.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 237.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 202.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 179.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 171.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 163.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 156.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 155.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 155.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 149.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 148.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 147.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.3
FF:10169-103B7 60 years, female 48.8
FF:10153-102I9 76 years, female 43.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.5
Pig sample Sample description nTPM
Subiculum
nTPM: 13.7
Samples: 4

Max nTPM: 18.0
Min nTPM: 12.0
Sample A Female 18.0
Sample B Female 12.7
Sample C Male 12.1
Sample D Male 12.0
Dorsal hippocampus
nTPM: 14.9
Samples: 4

Max nTPM: 18.1
Min nTPM: 13.0
Sample A Female 18.1
Sample B Female 13.0
Sample C Male 15.2
Sample D Male 13.2
Entorhinal cortex
nTPM: 15.5
Samples: 4

Max nTPM: 17.5
Min nTPM: 14.1
Sample A Female 15.3
Sample B Female 17.5
Sample C Male 15.0
Sample D Male 14.1
Ventral hippocampus
nTPM: 14.2
Samples: 4

Max nTPM: 15.7
Min nTPM: 11.8
Sample A Female 15.7
Sample B Female 11.8
Sample C Male 15.0
Sample D Male 14.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 2.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.8
Samples: 4

Max nTPM: 4.3
Min nTPM: 1.8
Sample A Male 1.8
Sample B Male 4.3
Sample C Female 3.1
Sample D Female 1.9
Hippocampal formation
nTPM: 2.4
Samples: 4

Max nTPM: 3.9
Min nTPM: 1.0
Sample A Male 2.7
Sample B Male 2.0
Sample C Female 3.9
Sample D Female 1.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
70546209 Antisense, RP_050623_03_G05, Mouse strain C57BL/6J (56 days, male) 0.2

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