HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:26.0 nTPM
HPA Brain:59.3 nTPM
GTEx:26.0 nTPM
FANTOM5:33.3 Scaled Tags Per Million
Pig:129.4 nTPM
Mouse:42.9 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 59.3
Sample id Sample description nTPM
Hippocampus
nTPM: 45.0
1898 Male, age 80, left hemisphere 49.1
1855 Male, age 76, left hemisphere 48.2
2148 Female, age 91, left hemisphere 45.2
2621 Female, age 67, right hemisphere 43.5
1911 Female, age 85, right hemisphere 42.6
2529 Female, age 94, left hemisphere 41.3
Dentate gyrus
nTPM: 50.8
2010 Male, age 76, both hemispheres 53.7
1927 Female, age 91, both hemispheres 51.9
2528 Male, age 74, both hemispheres 51.7
2246 Female, age 85, both hemispheres 50.3
2530 Female, age 94, left hemisphere 49.0
2531 Female, age 67, both hemispheres 48.1
Entorhinal gyrus
nTPM: 47.1
2764 Male, age 80, right hemisphere 54.7
2613 Female, age 94, left hemisphere 52.1
1787 Male, age 76, left hemisphere 48.4
1938 Female, age 85, left hemisphere 47.9
2117 Female, age 91, right hemisphere 42.0
2686 Male, age 75, right hemisphere 37.3
Hippocampus, CA1
nTPM: 55.2
2749 Male, age 80, left hemisphere 63.9
2045 Male, age 76, both hemispheres 61.5
1873 Female, age 85, both hemispheres 53.3
2527 Male, age 74, both hemispheres 50.0
2082 Female, age 91, right hemisphere 47.3
Hippocampus, CA2
nTPM: 49.0
1892 Male, age 76, both hemispheres 56.6
1940 Female, age 85, left hemisphere 53.8
1963 Male, age 80, left hemisphere 51.9
2113 Female, age 91, right hemisphere 46.9
2249 Male, age 74, both hemispheres 45.5
2437 Female, age 94, left hemisphere 39.4
Hippocampus, CA3
nTPM: 47.9
2137 Male, age 80, left hemisphere 53.1
1891 Female, age 85, both hemispheres 52.6
1867 Male, age 76, both hemispheres 52.0
2620 Female, age 94, left hemisphere 50.0
2436 Male, age 74, both hemispheres 45.5
2861 Female, age 67, both hemispheres 34.0
Parahippocampal cortex
nTPM: 50.5
2693 Female, age 94, both hemispheres 63.9
1850 Male, age 80, both hemispheres 56.9
2250 Female, age 67, right hemisphere 55.6
1933 Female, age 85, both hemispheres 54.9
1990 Female, age 91, right hemisphere 54.8
2245 Female, age 91, both hemispheres 48.5
2018 Male, age 76, both hemispheres 47.6
2532 Female, age 72, left hemisphere 44.0
2692 Male, age 74, both hemispheres 42.2
2622 Female, age 67, right hemisphere 36.1
Perirhinal gyrus
nTPM: 59.3
2521 Female, age 94, right hemisphere 76.0
1847 Female, age 91, left hemisphere 59.9
1794 Male, age 80, right hemisphere 58.6
1841 Female, age 85, right hemisphere 51.6
2848 Male, age 76, right hemisphere 50.2
Subiculum
nTPM: 48.2
2438 Female, age 94, left hemisphere 53.5
1901 Male, age 80, both hemispheres 52.1
1977 Female, age 85, both hemispheres 51.9
2619 Male, age 74, both hemispheres 47.0
2042 Male, age 76, both hemispheres 44.0
2729 Female, age 91, right hemisphere 40.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.0
Samples: 197

Max nTPM: 55.7
Min nTPM: 11.6
Std nTPM: 7.9
Median nTPM: 25.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 55.7
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 54.4
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 47.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 47.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 43.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 43.5
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 41.7
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 41.2
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 40.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 40.4
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 39.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.3
FF:10169-103B7 60 years, female 47.7
FF:10153-102I9 76 years, female 18.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 129.4
Pig sample Sample description nTPM
Subiculum
nTPM: 129.4
Samples: 4

Max nTPM: 149.5
Min nTPM: 117.9
Sample A Female 149.5
Sample B Female 117.9
Sample C Male 131.8
Sample D Male 118.4
Dorsal hippocampus
nTPM: 124.6
Samples: 4

Max nTPM: 144.8
Min nTPM: 103.2
Sample A Female 144.8
Sample B Female 128.7
Sample C Male 121.5
Sample D Male 103.2
Entorhinal cortex
nTPM: 113.0
Samples: 4

Max nTPM: 128.3
Min nTPM: 91.0
Sample A Female 128.3
Sample B Female 91.0
Sample C Male 123.1
Sample D Male 109.4
Ventral hippocampus
nTPM: 122.9
Samples: 4

Max nTPM: 149.2
Min nTPM: 88.2
Sample A Female 119.5
Sample B Female 88.2
Sample C Male 149.2
Sample D Male 134.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 42.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 42.7
Samples: 4

Max nTPM: 45.7
Min nTPM: 36.0
Sample A Male 36.0
Sample B Male 44.9
Sample C Female 44.1
Sample D Female 45.7
Hippocampal formation
nTPM: 42.9
Samples: 4

Max nTPM: 46.9
Min nTPM: 39.4
Sample A Male 46.9
Sample B Male 44.3
Sample C Female 39.4
Sample D Female 40.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
74990483 Antisense, RP_060410_01_A06, Mouse strain C57BL/6J (56 days, male) 1.7
112643861 Antisense, RP_110421_01_B05, Mouse strain C57BL/6J (56 days, male) 1.5

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