HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:18.7 nTPM
HPA Brain:52.6 nTPM
GTEx:18.7 nTPM
FANTOM5:147.5 Scaled Tags Per Million
Pig:43.9 nTPM
Mouse:14.3 nTPM
Allen mouse:6.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046133Antibody HPA056045
Glial cells Not detectedMedium
Neuronal cells LowMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 52.6
Sample id Sample description nTPM
Hippocampus
nTPM: 37.2
2529 Female, age 94, left hemisphere 42.6
1911 Female, age 85, right hemisphere 40.1
1898 Male, age 80, left hemisphere 37.7
2621 Female, age 67, right hemisphere 37.5
1855 Male, age 76, left hemisphere 34.2
2148 Female, age 91, left hemisphere 31.3
Dentate gyrus
nTPM: 38.6
2530 Female, age 94, left hemisphere 50.7
2010 Male, age 76, both hemispheres 43.8
2528 Male, age 74, both hemispheres 39.9
2246 Female, age 85, both hemispheres 36.5
2531 Female, age 67, both hemispheres 31.2
1927 Female, age 91, both hemispheres 29.7
Entorhinal gyrus
nTPM: 45.3
2117 Female, age 91, right hemisphere 68.6
2764 Male, age 80, right hemisphere 44.4
2686 Male, age 75, right hemisphere 42.1
2613 Female, age 94, left hemisphere 40.7
1938 Female, age 85, left hemisphere 39.3
1787 Male, age 76, left hemisphere 36.8
Hippocampus, CA1
nTPM: 33.1
2527 Male, age 74, both hemispheres 38.3
2082 Female, age 91, right hemisphere 36.6
2749 Male, age 80, left hemisphere 31.8
1873 Female, age 85, both hemispheres 30.8
2045 Male, age 76, both hemispheres 28.0
Hippocampus, CA2
nTPM: 40.1
1963 Male, age 80, left hemisphere 47.0
2437 Female, age 94, left hemisphere 41.4
1940 Female, age 85, left hemisphere 40.2
2249 Male, age 74, both hemispheres 40.2
2113 Female, age 91, right hemisphere 39.8
1892 Male, age 76, both hemispheres 32.0
Hippocampus, CA3
nTPM: 32.8
1891 Female, age 85, both hemispheres 55.2
1867 Male, age 76, both hemispheres 40.1
2436 Male, age 74, both hemispheres 32.6
2137 Male, age 80, left hemisphere 27.9
2861 Female, age 67, both hemispheres 20.8
2620 Female, age 94, left hemisphere 20.2
Parahippocampal cortex
nTPM: 39.1
2692 Male, age 74, both hemispheres 52.0
1990 Female, age 91, right hemisphere 49.6
2532 Female, age 72, left hemisphere 47.1
1850 Male, age 80, both hemispheres 39.4
2018 Male, age 76, both hemispheres 38.4
1933 Female, age 85, both hemispheres 36.5
2245 Female, age 91, both hemispheres 36.1
2693 Female, age 94, both hemispheres 35.8
2250 Female, age 67, right hemisphere 31.2
2622 Female, age 67, right hemisphere 24.5
Perirhinal gyrus
nTPM: 31.9
2521 Female, age 94, right hemisphere 35.2
2848 Male, age 76, right hemisphere 34.1
1847 Female, age 91, left hemisphere 31.9
1841 Female, age 85, right hemisphere 29.9
1794 Male, age 80, right hemisphere 28.6
Subiculum
nTPM: 52.6
2042 Male, age 76, both hemispheres 65.4
1901 Male, age 80, both hemispheres 60.1
2438 Female, age 94, left hemisphere 54.1
1977 Female, age 85, both hemispheres 52.3
2619 Male, age 74, both hemispheres 44.7
2729 Female, age 91, right hemisphere 38.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.7
Samples: 197

Max nTPM: 54.2
Min nTPM: 6.5
Std nTPM: 9.0
Median nTPM: 16.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 54.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 48.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 48.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 45.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 42.6
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 39.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 38.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 38.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 38.0
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 37.9
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 37.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 147.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 147.5
FF:10153-102I9 76 years, female 149.7
FF:10169-103B7 60 years, female 145.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.9
Pig sample Sample description nTPM
Subiculum
nTPM: 34.3
Samples: 4

Max nTPM: 40.2
Min nTPM: 29.8
Sample A Female 40.2
Sample B Female 35.7
Sample C Male 31.6
Sample D Male 29.8
Dorsal hippocampus
nTPM: 44.0
Samples: 4

Max nTPM: 58.3
Min nTPM: 24.3
Sample A Female 56.7
Sample B Female 36.5
Sample C Male 58.3
Sample D Male 24.3
Entorhinal cortex
nTPM: 30.6
Samples: 4

Max nTPM: 35.8
Min nTPM: 27.4
Sample A Female 30.5
Sample B Female 35.8
Sample C Male 27.4
Sample D Male 28.5
Ventral hippocampus
nTPM: 36.5
Samples: 4

Max nTPM: 41.4
Min nTPM: 27.4
Sample A Female 38.1
Sample B Female 27.4
Sample C Male 39.1
Sample D Male 41.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.3
Samples: 4

Max nTPM: 15.6
Min nTPM: 11.4
Sample A Male 15.6
Sample B Male 14.6
Sample C Female 11.4
Sample D Female 15.6
Hippocampal formation
nTPM: 11.8
Samples: 4

Max nTPM: 14.8
Min nTPM: 9.6
Sample A Male 9.6
Sample B Male 12.8
Sample C Female 14.8
Sample D Female 9.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.4
73606642 Antisense, RP_051130_01_C11, Mouse strain C57BL/6J (56 days, male) 6.4

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